Protein Alignment Rb97D and NUC-L2

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_188491.1
• Gene: NUC-L2 / 821392
• AraportID: AT3G18610
• Length: 636
• Species: Arabidopsis thaliana
• Alignment Length: 218
• Identity: 56/218 - (25%)
• Similarity: 94/218 - (43%)
• Gaps: 54/218 - (24%)

  Fly     3 KDEPLSDESADVIVLADREED--------------DICELEH-----------------LRKLFI 36
            |.|..||||:|.   :|:||.              ::.:.|.                 .:.||.
plant   327 KQESSSDESSDE---SDKEESKDEKVTPKKKDSDVEMVDAEQKSNAKQPKTPTNQTQGGSKTLFA 388

  Fly    37 GGLAPYTTEENLKLFYGQWGKVVDVVV--MRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDG 99
            |.|:......:::.|:.:.|:||||.:  ..|.:.|   |:|.|.:.......:|.|....::.|
plant   389 GNLSYQIARSDIENFFKEAGEVVDVRLSSFDDGSFK---GYGHIEFASPEEAQKALEMNGKLLLG 450

  Fly   100 KTVEA----KRALPR---PERE---SRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKL 154
            :.|..    :|..||   |.|:   |:...|.|:. |...|.::..::.||.:|.:.|.|..|.:
plant   451 RDVRLDLANERGTPRNSNPGRKGEGSQSRTIYVRG-FSSSLGEDEIKKELRSHFSKCGEVTRVHV 514

  Fly   155 LTDKTTGKRRGFAFVE----FDD 173
            .||:.||..||||:::    ||:
plant   515 PTDRETGASRGFAYIDLTSGFDE 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	18/54 (33%)
		RRM_SF	33..110	CDD:473069	20/82 (24%)
NUC-L2	NP_188491.1	RRM1_NUCLs	385..461	CDD:409884	19/78 (24%)
		RRM2_NUCLs	480..556	CDD:409885	20/59 (34%)