Protein Alignment Rb97D and AT3G14100

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_188026.1
• Gene: AT3G14100 / 820626
• AraportID: AT3G14100
• Length: 427
• Species: Arabidopsis thaliana
• Alignment Length: 329
• Identity: 75/329 - (22%)
• Similarity: 106/329 - (32%)
• Gaps: 123/329 - (37%)

  Fly    34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHII- 97
            :|:|.|:|..|:..|...:..:....|..||.|..|.|||||||:::       |.|::....|
plant   146 IFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGFGFVSF-------RNQQDAQTAIN 203

  Fly    98 ------------------------------DGKTV---------EAKRALPRPERESRETNISVK 123
                                          |||:|         :.|..|   ..|:.|.|....
plant   204 EMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSEDGKETL---NEETPENNSQFT 265

  Fly   124 KLFVGGLKDNHDEECLREYF--LQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQH 186
            .::||.|.....:..|..||  |..|.:..|::..||      ||.||.::.:.....||
plant   266 TVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDK------GFGFVRYNTHPEAALAI----- 319

  Fly   187 AIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPP--NGNMQAPSFRPPVP 249
                                                     |.|..||.  |..::......|.|
plant   320 -----------------------------------------QMGNTQPYLFNRQIKCSWGNKPTP 343

  Fly   250 PQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQ-------MNGWGPYPPPQQN 307
            |..|..|.   |||||  ||.|     |.....:..|.:|....:       |:..|.:|..|.:
plant   344 PGTASNPL---PPPAP--APVP-----GLSAADLLNYERQLALSKMASVNALMHQQGQHPLRQAH 398

  Fly   308 GWNA 311
            |.||
plant   399 GINA 402

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	17/73 (23%)
		RRM_SF	33..110	CDD:473069	27/115 (23%)
AT3G14100	NP_188026.1	RRM1_PUB1	61..131	CDD:410026
		RRM2_PUB1	143..222	CDD:410031	21/82 (26%)
		RRM_SF	265..341	CDD:473069	22/127 (17%)