DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and GRP7

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_179760.1 Gene:GRP7 / 816705 AraportID:AT2G21660 Length:176 Species:Arabidopsis thaliana


Alignment Length:390 Identity:75/390 - (19%)
Similarity:126/390 - (32%) Gaps:145/390 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ASKRSLQQLEQEIQTLLSPVSTNPFPPPR-------------SRRSRGPTAQG-NRAPVLAVISL 60
            |.|:..:.|:::..:|....:.:|..|.|             |.|.:||..|. ||...| |:..
plant   111 ALKKERRSLQEDTTSLHGLGARSPVEPSRGTTITSTRLAIDSSDRLQGPANQNPNRNEEL-VMQE 174

  Fly    61 DCDDDPTPS----QPIFQSQY---RRV------------TRRSGANEAGTQ----SNTISLDSDD 102
            :.:.:..||    .||...:|   ||.            .||:|:....|.    .|....||::
plant   175 NLNGENLPSVPEVPPIHLERYVGSRRAQMSNTSDEHNEEMRRAGSLNVWTTHYPLMNAHLQDSEE 239

  Fly   103 ESG-------------------------------------------------------DGAVELE 112
            |:.                                                       .|..::.
plant   240 EASIASEISDHSLENIVGSSWYSMRNIREGTPIGSRLRHNIISGQTSPTGPQDIIRTTSGVTDMS 304

  Fly   113 PSFSAANSSFETENYEM----RIKIKWGRGIETFVHRRYQKFEDIFNQLAAKESADRACIFLNLD 173
            ||.|.:.|....|..|.    .::::...||...:.|   :.|.|.:|.|...:....   ::.|
plant   305 PSNSLSTSEDSLEEDEWPGVHAVEVQHLEGIREPLPR---EPEGINHQGALTPAVTNN---ISHD 363

  Fly   174 DRIVYASDTPDSIDYKPHQFIAGR-----------ILKTKAPI----LPTAHGSST-GHNSNMI- 221
            ..:..:..:|:           ||           ||...||:    .|||....| ..|.::| 
plant   364 PPLSTSRSSPE-----------GREQSLPLNDPFYILPFFAPLGLTPTPTAPNIQTLQENLDLIA 417

  Fly   222 -TLKVQMEKRKQPLRLQIDKNQTMSVLVIKCAEELKCEPKDIRLYFDGELVGNNDKPEDLDLEGD 285
             ||.....:|:       ...:|.::...|.||:.|.:|:.:|...:..|      .|||:.:||
plant   418 TTLPPIRHRRR-------TVGRTTAIEEKKVAEKPKADPERLRKIQESLL------QEDLEEDGD 469

  Fly   286  285
            plant   470  469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 11/75 (15%)
RRM_SF 33..110 CDD:473069 28/168 (17%)
GRP7NP_179760.1 RRM2_NsCP33_like 9..84 CDD:410187
Blue background indicates that the domain is not in the aligned region.

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