Protein Alignment Rb97D and Hnrnpd

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_077380.2
• Gene: Hnrnpd / 79256
• RGDID: 620365
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 317
• Identity: 100/317 - (31%)
• Similarity: 147/317 - (46%)
• Gaps: 74/317 - (23%)

  Fly     6 PLSDESADVIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATK 70
            |...|:|    .|.|||         .|:|||||:..||:::||.::.::|.|||..:..|..|.
  Rat    82 PRHTEAA----TAQREE---------WKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITG 133

  Fly    71 RSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHD 135
            |||||||:.:.:|..||:..:.:.|.::||.::.|||      ::.:|...|||:|||||..:..
  Rat   134 RSRGFGFVLFKESESVDKVMDQKEHKLNGKVIDPKRA------KAMKTKEPVKKIFVGGLSPDTP 192

  Fly   136 EECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIY 200
            ||.:||||..||.|.|::|..|..|.|||||.|:.|.:.:.|.|.:.||.|.:.....::|.::.
  Rat   193 EEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNVGLSKCEIKVAMS 257

  Fly   201 NLDKKEKQQ---PGGLANAIK-----PSLNQQQ-----QQQGGGQQPPNGNMQAPSFRPPVPPQQ 252
            ....:::||   .||.|...:     ||.|..|     ..||.|....|              .|
  Rat   258 KEQYQQQQQWGSRGGFAGRARGRGGGPSQNWNQGYSNYWNQGYGSYGYN--------------SQ 308

  Fly   253 AMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGW 309
            ..|.|             ..::|.|     ...||         |:|.| ..||:|:
  Rat   309 GYGGY-------------GGYDYTG-----YNSYY---------GYGDY-SNQQSGY 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	31/71 (44%)
		RRM_SF	33..110	CDD:473069	32/76 (42%)
Hnrnpd	NP_077380.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..89		3/10 (30%)
		CBFNT	<55..76	CDD:311868
		RRM1_hnRNPD	97..170	CDD:410150	29/72 (40%)
		RRM2_hnRNPD	181..255	CDD:241027	32/73 (44%)