Sequence 1: | NP_001014671.1 | Gene: | Rb97D / 43231 | FlyBaseID: | FBgn0004903 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006534494.1 | Gene: | Msi2 / 76626 | MGIID: | 1923876 | Length: | 378 | Species: | Mus musculus |
Alignment Length: | 409 | Identity: | 116/409 - (28%) |
---|---|---|---|
Similarity: | 164/409 - (40%) | Gaps: | 97/409 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHII 97
Fly 98 DGKTVEAKRALP-RPERESRETNIS---------------------VKKLFVGGLKDNHDEECLR 140
Fly 141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKK 205
Fly 206 EKQQPGGLANAIKPSLNQQQQQQGGGQQPP---------NGNMQAPSFRPPVPPQQAMGPYQQQP 261
Fly 262 PPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQ 326
Fly 327 WGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNW---NMPPPVPGAAPPSHQQQ------SSQQPT 382
Fly 383 PQPNFGTGYQQNYGGGPSK 401 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rb97D | NP_001014671.1 | RRM1_hnRNPA_like | 33..110 | CDD:241022 | 32/77 (42%) |
RRM2_hnRNPA_like | 124..196 | CDD:240774 | 31/71 (44%) | ||
Msi2 | XP_006534494.1 | RRM1_MSI | 23..97 | CDD:241020 | 29/73 (40%) |
PABP-1234 | <35..363 | CDD:130689 | 105/383 (27%) | ||
RRM2_MSI | 135..208 | CDD:240769 | 31/72 (43%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |