DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and Rbm31y

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_083246.1 Gene:Rbm31y / 74484 MGIID:1921734 Length:565 Species:Mus musculus


Alignment Length:254 Identity:70/254 - (27%)
Similarity:121/254 - (47%) Gaps:41/254 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SADVIVLADREEDDICE---------LEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRD 66
            :|.:.|..|.|.:...|         .:...|:|||||:...:::.|..:..::|:::|.::..|
Mouse     3 TASLAVEKDNETEQFREGFKIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTD 67

  Fly    67 AATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLK 131
            ..|..||||||:.:..|..|::..:.:.|.:|||.:|.|||      ::.|:....||:|||||.
Mouse    68 PNTGLSRGFGFVLFKDSATVEKVLQVKDHKVDGKKIEFKRA------KALESQFPNKKIFVGGLN 126

  Fly   132 DNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK 196
            ....||.:|.||..||.:.:::|.....|.:||.|.|:::.|.::|.|.:..:.|.|.....:||
Mouse   127 PRLSEEKIRAYFGTFGQIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCEVK 191

  Fly   197 KSIYNLDKKEKQQPGGLANAIK-----------PSLNQQQQQQGGGQQPPNGNMQAPSF 244
            .:.      .|:.|....:..|           |::..:...:|||         :|||
Mouse   192 MAY------PKENPARQLSKRKAIAKDRTRKSVPAVELENNWRGGG---------SPSF 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 24/71 (34%)
RRM_SF 33..110 CDD:473069 27/76 (36%)
Rbm31yNP_083246.1 RRM_SF 34..109 CDD:473069 27/80 (34%)
RRM_SF 119..193 CDD:473069 26/73 (36%)

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