Protein Alignment Rb97D and hnrnpab

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_012814656.1
• Gene: hnrnpab / 734098
• XenbaseID: XB-GENE-6042555
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 319
• Identity: 96/319 - (30%)
• Similarity: 146/319 - (45%)
• Gaps: 48/319 - (15%)

  Fly    13 DVIVLADREEDDIC------ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKR 71
            |.|..:..|||..|      .|....|:|:|||:..|::::||.::.::|:|.|..:..|..|.|
 Frog    40 DQINASKGEEDAGCVPDISSPLTEGVKMFVGGLSWDTSKKDLKDYFSKFGEVSDCTIKMDPNTGR 104

  Fly    72 SRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDE 136
            |||||||.:..:..||:..|.:.|.:||:.::.|:|:...:.       .:||:|||||.....|
 Frog   105 SRGFGFILFKDAASVDKVLEQKEHRLDGRLIDPKKAMAMKKD-------PIKKIFVGGLNPEAGE 162

  Fly   137 ECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK----K 197
            :.:||||..||.:.:::|..|..|.|||||.|:.|.:.:.|.|.:.||.|.:.....::|    |
 Frog   163 DKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKILEKKFHNVSGSKCEIKIAQPK 227

  Fly   198 SIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPP 262
            .:|      :||.||...:.     ..:..:||..|..|.|....|:.......|..|.|.||.
 Frog   228 EVY------QQQYGGRGGSF-----GGRGGRGGKAQGQNWNQGYNSYWNQGYGNQGYGGYGQQG- 280

  Fly   263 PAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQ 321
                .....|::|.|      ..||         |:||.....|...|....|..|:.|
 Frog   281 ----YGGYGNYDYSG------YGYY---------GYGPGYDYSQGSANYGKAPRRGSHQ 320

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	28/71 (39%)
		RRM_SF	33..110	CDD:473069	29/76 (38%)
hnrnpab	XP_012814656.1	CBFNT	1..52	CDD:311868	5/11 (45%)
		RRM1_hnRNPAB	61..140	CDD:410151	29/78 (37%)
		RRM2_hnRNPAB	145..224	CDD:409997	30/85 (35%)