DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and TIA1

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_071505.2 Gene:TIA1 / 7072 HGNCID:11802 Length:386 Species:Homo sapiens


Alignment Length:374 Identity:87/374 - (23%)
Similarity:142/374 - (37%) Gaps:104/374 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 DESADVIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSR 73
            |.|:..:|...|.:|      |.. :|:|.|:|..|.|::|..:..:|::.|..|::|.||.:|:
Human    90 DTSSSTVVSTQRSQD------HFH-VFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSK 147

  Fly    74 GFGFITYTKSLMVDRA-QENRPHIIDGKTVE---AKRALPRPER--ESRETNISVKK-------- 124
            |:||:::......:.| |:.....:.|:.:.   |.|..|.|:.  ||....:|..:        
Human   148 GYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPS 212

  Fly   125 ---LFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQH 186
               ::.||:.....|:.:|:.|..||.::.:::..||      |::||.|:.:::...||:....
Human   213 NCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDK------GYSFVRFNSHESAAHAIVSVNG 271

  Fly   187 AIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQ 251
            .....|  |.|..:..:..:...|            .|||.|.|..||                 
Human   272 TTIEGH--VVKCYWGKETLDMINP------------VQQQNQIGYPQP----------------- 305

  Fly   252 QAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPP 316
                                 :..||       .:|..  .||:   |.|.|   |||..|....
Human   306 ---------------------YGQWG-------QWYGN--AQQI---GQYMP---NGWQVPAYGM 334

  Fly   317 PGAQQWHANQWGCPPPVQQVPPVG---AVPPPMGHNGPP-PTAPGNWNM 361
            .| |.|  ||.|........|.:|   .|.||.|.||.. |..|..:.:
Human   335 YG-QAW--NQQGFNQTQSSAPWMGPNYGVQPPQGQNGSMLPNQPSGYRV 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 16/82 (20%)
RRM_SF 33..110 CDD:473069 22/80 (28%)
TIA1NP_071505.2 RRM1_TIA1 8..81 CDD:410027
RRM2_TIA1 104..181 CDD:410030 22/83 (27%)
RRM3_TIAR 214..286 CDD:241064 18/79 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 354..386 9/27 (33%)
Blue background indicates that the domain is not in the aligned region.

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