Protein Alignment Rb97D and dazap1

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_021335308.1
• Gene: dazap1 / 561459
• ZFINID: ZDB-GENE-070212-1
• Length: 469
• Species: Danio rerio
• Alignment Length: 515
• Identity: 139/515 - (26%)
• Similarity: 199/515 - (38%)
• Gaps: 137/515 - (26%)

  Fly    29 EHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENR 93
            :.:.|||:|||...||:|.|:.::.|:|:|||.|:|:|.:|.:||||||:.:.....|....:.:
Zfish    20 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTK 84

  Fly    94 PHIIDGKTVEAKRALPR---PERE--------SRETNISVKKLFVGGLKDNHDEECLREYFLQFG 147
            ||.:||:.::.|...||   ||:.        |:..:...||:||||:..|..|..||:||.:||
Zfish    85 PHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFG 149

  Fly   148 NVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPG- 211
            .|..|.::.|....:.|||.|:.|:...:||:|:....|.|....|:|||:    :.::.:.|.
Zfish   150 VVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKA----EPRDSKAPAP 210

  Fly   212 --------------GLAN--AIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVP-----PQQAMG 255
                          ..||  |.:|:...||.....|.....|...| .:.||:|     |.||..
Zfish   211 GQLGANQWGPRAIISAANGWAAQPAPTWQQSYGPQGVWVSTGQPLA-GYGPPLPAGRGAPAQAPS 274

  Fly   256 PYQ----QQPPPAPMSAP----------PPNFNY-WG------------PPPPAMP---PYYQQP 290
            |:.    ..||.....||          .|.|.| :|            |||||.|   |.
Zfish   275 PFNAFLVAAPPTGGFGAPQGYPQQGFSTQPQFGYSFGTPQGDQFVAQGMPPPPATPGAGPL---- 335

  Fly   291 PPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHNGPP--- 352
                  |:.|...|.|:...|.|..|..:...:.....|..                ..|.|
Zfish   336 ------GFAPATTPSQDLSKAAPAQPDFSYSQYEYLLRCST----------------EEGKPFMV 378

  Fly   353 --PTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNYGGGPSKHNNMNANRMNPYSA 415
              ....||:...|...|...|||.....:|         ||...||...|...
Zfish   379 ELQEGLGNYPQDPSAYGPTRPSHTYVQEEQ---------GYSAGYGQDLSAFG------------ 422

  Fly   416 GPPNSYHTPQPPAYTGYNAGPLPPNGSVPPPTGAKAVGVSNGSVATGGSANSK----YRR 471
               :|:..|..|. ..|.|.|..|:      :||.|...|.|   .|.:.|.:    |||
Zfish   423 ---HSFADPSQPT-ASYAAAPSAPS------SGAPAAASSFG---RGQNHNVQGFHPYRR 469

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	27/71 (38%)
		RRM_SF	33..110	CDD:473069	31/76 (41%)
dazap1	XP_021335308.1	RRM1_DAZAP1	24..105	CDD:409988	33/80 (41%)
		RRM2_DAZAP1	127..202	CDD:409765	29/78 (37%)
		PRK10263	<220..>430	CDD:236669	56/260 (22%)