Protein Alignment Rb97D and msi1

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_012816886.1
• Gene: msi1 / 496961
• XenbaseID: XB-GENE-490596
• Length: 347
• Species: Xenopus tropicalis
• Alignment Length: 394
• Identity: 115/394 - (29%)
• Similarity: 158/394 - (40%)
• Gaps: 105/394 - (26%)

  Fly    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHII 97
            |:|||||:..||:|.|:.::..:|.|.:.:||||..|||||||||:|:.....||:......|.:
 Frog    21 KMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHEL 85

  Fly    98 DGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGK 162
            |.||::.|.|.||..:....|.  .||:|||||..|...|.:::||.|||.|....|:.||||.:
 Frog    86 DSKTIDPKVAFPRRAQPKMVTR--TKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNR 148

  Fly   163 RRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQ 227
            .|||.||.|:..|.|:|......|.|....|:.||:    ..||...|.|             ..
 Frog   149 HRGFGFVTFEGEDIVEKVCDIHFHEINNKMVECKKA----QPKEVMSPTG-------------SV 196

  Fly   228 QGGGQQPPNGNMQA----------PSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPA 282
            :|..:..|.| |.|          |.|:                     :|...:.:|.|    .
 Frog   197 RGRSRVMPYG-MDAFMLGIGMLGYPGFQ---------------------AATYASRSYTG----I 235

  Fly   283 MPPY-YQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCP--PPVQQVP-----PV 339
            .|.| ||.|.                 :.....|.|||          |  |.:..:|     ||
 Frog   236 APGYTYQFPE-----------------FRVERTPLPGA----------PVLPELTAIPLTAYGPV 273

  Fly   340 GAVPPPMGHNGPPPTAPGNW---NMPPPVPGAAPPSHQQQ------SSQQPTPQPNFGTGYQQNY 395
            .|....: ..|..||..|.:   :.|.|:......::|:.      |:..|.|...||...
 Frog   274 AAAAAAV-VRGSTPTRTGGFLGTSSPGPMAELYGAANQESAVSSYISAASPAPSTGFGHSL---- 333

  Fly   396 GGGP 399
             |||
 Frog   334 -GGP 336

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	34/76 (45%)
		RRM2_hnRNPA_like	124..196	CDD:240774	31/71 (44%)
msi1	XP_012816886.1	RRM1_MSI1	20..96	CDD:241203	33/74 (45%)
		PABP-1234	<32..324	CDD:130689	101/364 (28%)
		RRM2_MSI	110..183	CDD:240769	31/72 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910