Protein Alignment Rb97D and snrnp70

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001268699.1
• Gene: snrnp70 / 493488
• XenbaseID: XB-GENE-992818
• Length: 471
• Species: Xenopus tropicalis
• Alignment Length: 161
• Identity: 38/161 - (23%)
• Similarity: 66/161 - (40%)
• Gaps: 33/161 - (20%)

  Fly    38 GLAPYTTE-ENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKT 101
            |:|||..| |:.:          |......|.|:..|    :...:...::|.|::
 Frog    40 GIAPYIREFEDPR----------DAPPPTRAETREER----MERKRREKIERRQQD--------- 81

  Fly   102 VEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGF 166
            ||.:..:..|..:......:.|.|||..:..:..|..||..|..:|.:..:.::.:|.:||.||:
 Frog    82 VENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKRIHMVYNKRSGKPRGY 146

  Fly   167 AFVEFDDYDAVDKAILKKQHAIKYVHVDVKK 197
            ||:|::....:..|         |.|.|.||
 Frog   147 AFIEYEHERDMHSA---------YKHADGKK 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	20/71 (28%)
		RRM_SF	33..110	CDD:473069	14/72 (19%)
snrnp70	NP_001268699.1	U1snRNP70_N	3..94	CDD:432406	15/76 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	48..78		5/43 (12%)
		Required for interaction with U1 RNA. /evidence=ECO:0000250|UniProtKB:P08621	92..202		23/86 (27%)
		RRM_snRNP70	102..187	CDD:409682	23/76 (30%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	187..471