Protein Alignment Rb97D and trv

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001163754.3
• Gene: trv / 43362
• FlyBaseID: FBgn0085391
• Length: 651
• Species: Drosophila melanogaster
• Alignment Length: 413
• Identity: 86/413 - (20%)
• Similarity: 133/413 - (32%)
• Gaps: 130/413 - (31%)

  Fly    19 DREEDDICELEHLRKL------FIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGF 77
            |.|:.|. |:|::..|      |:|.|:.....:.|:..:..:|::.|..|:||..|.:|:|:||
  Fly   294 DMEDSDE-EMEYMPPLHKQFHIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGF 357

  Fly    78 ITYTKSLMVDRA-QENRPHIIDGKTVEAKRALPRPE---------------RESRETNISVKKLF 126
            :::.|....:.| .......:..:::....|..:|.               .:|..:|.:|   :
  Fly   358 VSFIKKSEAESAITAMNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYNQSSPSNCTV---Y 419

  Fly   127 VGGLKD---NHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAI 188
            |||:..   ...||.|::.|..:|.:..:::..||      |:|||.|...:|.       .|||
  Fly   420 VGGVNSALTALSEEVLQKTFAPYGAIQEIRVFKDK------GYAFVRFSTKEAA-------THAI 471

  Fly   189 KYVH------VDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPP 247
            ..||      ..||.|.    .||...|.........:||.......|             |...
  Fly   472 VGVHNTEINAQPVKCSW----GKESGDPNNAQTIATQALNSAAAAAAG-------------FPYG 519

  Fly   248 VPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAP 312
            |....|...|.||     ::|.    ..|..|.|.                  ||..........
  Fly   520 VGAAAAAAAYGQQ-----LAAT----GCWYSPTPT------------------YPASSATAAAVT 557

  Fly   313 PPPP----------PGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPG 367
            |...          .|.|.:|..|:|   ..||           |:.|.....|..|
  Fly   558 PAAASAAAVQNQFLQGIQGYHFGQYG---GYQQ-----------GYMGMGVQIPATW-------- 600

  Fly   368 AAPPSHQQQSSQQPTPQPNFGTG 390
                  |..:..|.:|.....||
  Fly   601 ------QGVTQAQISPAQQLATG 617

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	21/80 (26%)
		RRM_SF	33..110	CDD:473069	18/83 (22%)
trv	NP_001163754.3	RRM2_TIA1_like	313..387	CDD:409789	16/73 (22%)
		RRM3_TIA1_like	416..489	CDD:409790	25/92 (27%)