Protein Alignment Rb97D and Syp

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001262777.1
• Gene: Syp / 42460
• FlyBaseID: FBgn0038826
• Length: 761
• Species: Drosophila melanogaster
• Alignment Length: 379
• Identity: 81/379 - (21%)
• Similarity: 128/379 - (33%)
• Gaps: 143/379 - (37%)

  Fly    26 CELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTK-------- 82
            ||      :|.|.:.....|:.|...:...|.:.|:.:|.|..|..:||:.|:|:|.
  Fly   206 CE------VFCGKIPKDMYEDELIPLFENCGIIWDLRLMMDPMTGTNRGYAFVTFTNREAAVNAV 264

  Fly    83 -----------------------SLMVDRAQENRPH-----------------II----DGKTVE 103
                                   .|.|....:||..                 ||    |.|...
  Fly   265 RQLNDFEIRTGKKIGVTISFNNHRLFVGNIPKNRDRDELIEEFSKHAPGLYEVIIYSSPDDKKKN 329

  Fly   104 ----------------AKRAL----------------PRPERESRETNIS-VKKLFVGGLKDNHD 135
                            |||.|                ..|:.|..|..:| ||.|:|..|..:..
  Fly   330 RGFCFLEYESHKAASLAKRRLGTGRIKVWGCDIIVDWADPQEEPDEQTMSKVKVLYVRNLTQDVS 394

  Fly   136 EECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKA---ILKKQHAIKYVHVDVKK 197
            |:.|:|.|.|:|.|..||.:.|        :||:.|:|.|:..:|   :..|:.....:.|.:.|
  Fly   395 EDKLKEQFEQYGKVERVKKIKD--------YAFIHFEDRDSAVEAMRGLNGKEIGASNIEVSLAK 451

  Fly   198 SIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPP 262
            .  ..|||:|::          .|..::::.          ||....||.:...:.:.||:...|
  Fly   452 P--PSDKKKKEE----------ILRARERRM----------MQMMQARPGIVGFETLSPYRNLSP 494

  Fly   263 --PAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMN------GWGPYPPPQQNG 308
              |:.||..|..      |...||  .:.|.|::.:      |:..|   :|.|
  Fly   495 THPSIMSLTPMR------PGARMP--LRTPIPREYDYFYDFFGFSDY---RQGG 537

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	26/160 (16%)
		RRM2_hnRNPA_like	124..196	CDD:240774	21/74 (28%)
Syp	NP_001262777.1	RRM1_hnRNPR_like	205..283	CDD:240695	16/82 (20%)
		RRM2_hnRNPR_like	286..367	CDD:240696	12/80 (15%)
		RRM3_hnRNPR_like	381..452	CDD:240697	23/78 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463962
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840