Protein Alignment Rb97D and Rbp4

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_476935.1
• Gene: Rbp4 / 41668
• FlyBaseID: FBgn0010258
• Length: 428
• Species: Drosophila melanogaster
• Alignment Length: 478
• Identity: 146/478 - (30%)
• Similarity: 191/478 - (39%)
• Gaps: 137/478 - (28%)

  Fly    29 EHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENR 93
            |||||:|||||:..||.|.|:.|:.|:|.|.|.||:||..:..||||||:||.....|:..|..|
  Fly    29 EHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDPKSVEIVQRAR 93

  Fly    94 PHIIDGKTVEAKRALPRPERESRETNISV-------------KKLFVGGLKDNHDEECLREYFLQ 145
            ||.||.|.||.|.||||.:.:......||             |::|:||||:.|||..:||||.|
  Fly    94 PHTIDNKIVETKHALPRQDFKRGGGVGSVVGSFGCEAGFMNSKRIFLGGLKEYHDENIVREYFSQ 158

  Fly   146 FGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQP 210
            ||.|.|||||.|:.||::|.|.|:||.|..:.:||:..::|.|....|:||:|....|::
  Fly   159 FGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEKALAPRKHWILQTLVEVKRSTQKADRR----- 218

  Fly   211 GGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNY 275
                                             ||.|:......|    ..||.|.:|...|:|
  Fly   219 ---------------------------------FRFPIFSSVRAG----YIPPQPATADSYNYN- 245

  Fly   276 WGPPPPAMPPYYQQ---PPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVP 337
                .|...||..|   ||....|||..|..|.      .|.|.|| |...|:.     |.||:
  Fly   246 ----NPNYNPYLAQSVLPPSAFTNGWAHYVIPM------APKPTPG-QNMAASL-----PSQQL- 293

  Fly   338 PVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNYGGGPSK- 401
               |.....||      .|..|:..|..  ....:.:..||:.....|..|..:.|......:|
  Fly   294 ---AEHSLNGH------GPDMWSSYPKT--GIYSAQEWTSSKVAEWGPKAGHKHAQTSTNDRAKI 347

  Fly   402 ---------HNNM-------NANRMNPYSAG-----------------PPNSYHTPQPPAYTGYN 433
                     .||.       :|:||:....|                 |...|...:|
  Fly   348 DLKELQAATFNNKLDFGARGDADRMSGAGLGLGLTGGAAVGVGAIKKWPTQDYKVFKP------- 405

  Fly   434 AGPLPPNGSVP--------PPTG 448
             ...|.||.:|        ||.|
  Fly   406 -AKSPTNGVIPKIGKEATTPPYG 427

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	40/76 (53%)
		RRM2_hnRNPA_like	124..196	CDD:240774	35/71 (49%)
Rbp4	NP_476935.1	RRM_SF	33..110	CDD:302621	40/76 (53%)
		RRM2_hnRNPA_like	137..209	CDD:240774	35/71 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45463976
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E33208_3BA81
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.750