DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and CG2931

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_649552.1 Gene:CG2931 / 40673 FlyBaseID:FBgn0037342 Length:302 Species:Drosophila melanogaster


Alignment Length:164 Identity:39/164 - (23%)
Similarity:76/164 - (46%) Gaps:38/164 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TKSLMVDRAQENRPHIIDGKTVEAKRA------LPRPERESRETNISVK---------------- 123
            |:.|...:|:::.|:.|..:.::|.||      ....||:.::.. :|:                
  Fly   131 TQKLKKLKAEKSGPNPIAEEAIKAARASSALQSFQTTERKKKDRK-TVRIAGGTVWEDTSLADWP 194

  Fly   124 ----KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK 184
                ::|.|.|.::.::|.|...|.:|.:....:::.||.|||.:||.||.|  .:..|.....|
  Fly   195 DDDFRIFCGDLGNDVNDEVLTRTFNKFPSFQRARVVRDKRTGKSKGFGFVSF--REPADFIRAMK 257

  Fly   185 QHAIKYV---HVDVKKSIY---NLD---KKEKQQ 209
            :...:||   .:.::||.:   :||   |||:::
  Fly   258 EMDGRYVGSRPIKLRKSTWRQRSLDVVKKKEREK 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 21/74 (28%)
RRM_SF 33..110 CDD:473069 8/34 (24%)
CG2931NP_649552.1 RRM_RBM42 192..274 CDD:409817 21/83 (25%)

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