Protein Alignment Rb97D and hnrnpdl

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001315423.1
• Gene: hnrnpdl / 406701
• ZFINID: ZDB-GENE-040426-2717
• Length: 296
• Species: Danio rerio
• Alignment Length: 248
• Identity: 82/248 - (33%)
• Similarity: 119/248 - (47%)
• Gaps: 34/248 - (13%)

  Fly     5 EPLSDESAD------VIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVV 63
            |...|.|.|      .|..:..:|||       .|:|||||:..|::::|..:..::|:|:|..:
Zfish     4 EEQGDFSTDEFPEGSKINASKNQEDD-------GKMFIGGLSWDTSKKDLTDYLSRFGEVLDCTI 61

  Fly    64 MRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVG 128
            ..|..|.|||||||:.:..:..|||..|...|.:|||.::.|||.....:|      ..||:|||
Zfish    62 KTDPLTGRSRGFGFVLFKDAESVDRVLELTEHKLDGKLIDPKRAKAIKGKE------PPKKVFVG 120

  Fly   129 GLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHV 193
            ||..:..||.|||||..:|.:.|::|.||..|.:||||.||.|...:.|.|.:..:.|.|.....
Zfish   121 GLSPDITEEQLREYFGVYGEIESIELPTDTKTNERRGFCFVTFALEEPVQKLLENRYHQIGSGKC 185

  Fly   194 DVK----KSIYNLDKKEKQQPGGLANAIK------PSLNQ-----QQQQQGGG 231
            ::|    |.:|...:...:..||.....:      ...||     ..|..|||
Zfish   186 EIKVAQPKEVYRQQQNRDRGFGGGRGGFRGRGGRGQGFNQGYNNYYGQNYGGG 238

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	30/71 (42%)
		RRM_SF	33..110	CDD:473069	31/76 (41%)
hnrnpdl	NP_001315423.1	RRM_SF	31..106	CDD:473069	30/74 (41%)
		RRM2_hnRPDL	116..190	CDD:409998	31/73 (42%)