Protein Alignment Rb97D and hnrnpabb

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_998467.1
• Gene: hnrnpabb / 406594
• ZFINID: ZDB-GENE-040426-2516
• Length: 309
• Species: Danio rerio
• Alignment Length: 233
• Identity: 82/233 - (35%)
• Similarity: 122/233 - (52%)
• Gaps: 31/233 - (13%)

  Fly    26 CELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
            || |...|:|:|||:..|::::||.::.::|:|:|..:..|:.|.||||||||.:.:|..|||..
Zfish    40 CE-EDAGKMFVGGLSWDTSKKDLKDYFSKFGEVMDCTIKMDSNTGRSRGFGFILFKESDSVDRVL 103

  Fly    91 ENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLL 155
            :.:.|.:||:.::.|||:...:.       .|||:|||||.....||.:||||..||.:.:::|.
Zfish   104 QQKEHRLDGRQIDPKRAMAIKKE-------PVKKIFVGGLNPETTEEKIREYFGSFGEIETIELP 161

  Fly   156 TDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK----KSIYNLDKKEKQQ------- 209
            ||..|.|||||.|:.|.:..||.|.:.||.|.:.....::|    |.||     ::||
Zfish   162 TDPKTSKRRGFVFITFKEEFAVKKILEKKYHNVCGSKCEIKIAQPKEIY-----QQQQFGARGGG 221

  Fly   210 -------PGGLANAIKPSLNQQQQQQGGGQQPPNGNMQ 240
                   .||...:.....|....|..|||....|..|
Zfish   222 FGGRGRGRGGPGQSWNQGYNNYWNQGYGGQGYGYGGQQ 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	31/76 (41%)
		RRM2_hnRNPA_like	124..196	CDD:240774	31/71 (44%)
hnrnpabb	NP_998467.1	CBFNT	2..45	CDD:285369	3/5 (60%)
		RRM1_hnRNPAB	46..120	CDD:241201	29/73 (40%)
		RRM_SF	125..204	CDD:302621	34/85 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.920