Protein Alignment Rb97D and tra2b

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_957491.1
• Gene: tra2b / 394172
• ZFINID: ZDB-GENE-040426-1094
• Length: 278
• Species: Danio rerio
• Alignment Length: 182
• Identity: 46/182 - (25%)
• Similarity: 71/182 - (39%)
• Gaps: 52/182 - (28%)

  Fly     6 PLSDESADVIVLADREEDD--ICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAA 68
            |:|:....:   .||...|  .|       |.:.||:.||||.:|:..:.::|.:.||.::.|..
Zfish   105 PMSNRRRHI---GDRANPDPNCC-------LGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQ 159

  Fly    69 TKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNI--SVKK------- 124
            ::|||||..:.:          |||.   |.|  |||......|.:.|...:  |:.|
Zfish   160 SRRSRGFALVYF----------ENRE---DSK--EAKERANGMELDGRRIRVDYSITKGPHTPTP 209

  Fly   125 -LFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDK-TTGKRRGFAFVEFDDY 174
             :::|.              ..:|...||....|. ..|..||:...|..||
Zfish   210 GIYMGR--------------PTYGGGPSVSRRRDSYDRGYERGYDSYEDRDY 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	12/60 (20%)
		RRM_SF	33..110	CDD:473069	25/76 (33%)
tra2b	NP_957491.1	SF-CC1	23..>199	CDD:273721	33/118 (28%)
		RRM_TRA2B	116..202	CDD:410046	31/107 (29%)