Protein Alignment Rb97D and msi2b

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_957403.1
• Gene: msi2b / 394084
• ZFINID: ZDB-GENE-040426-1268
• Length: 408
• Species: Danio rerio
• Alignment Length: 436
• Identity: 122/436 - (27%)
• Similarity: 175/436 - (40%)
• Gaps: 95/436 - (21%)

  Fly    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHII 97
            |:|||||:..|:.::|:.::.::|::.:.:||||..|||||||||:|:..:..||:......|.:
Zfish    22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQPHHEL 86

  Fly    98 DGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGK 162
            |.||::.|.|.||..:....|.  .||:|||||..|...|.:::||.|||.|....|:.||||.:
Zfish    87 DSKTIDPKVAFPRRAQPKMVTR--TKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149

  Fly   163 RRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPG--GLANAIKPSLNQQQ 225
            .|||.||.|::.|.|:|......|.|....|:.||:   ..|:....||  |.|..:..:::...
Zfish   150 HRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKA---QPKEVMFPPGTRGRARGLPYTMDAFM 211

  Fly   226 QQQGGGQQP--------------PNGNMQAPSFRPPVPPQQAMGPYQQQPPPA------------ 264
            ...|....|              |:.:.|.|.|     |..|.||.......|
Zfish   212 LGMGMLSYPNIVATYGRGYTGFAPSYSYQFPGF-----PATAYGPVAAAAAVAAARGSGRGARGR 271

  Fly   265 ------PMSAPP--PNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQ 321
                  |.|..|  |::.::..|..      |:.||.....:|          :..|......|.
Zfish   272 GGYAAYPQSTGPGFPDYGFYSSPSD------QRGPPFSFADYG----------SLGPQAAQLLQS 320

  Fly   322 WHANQWGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQS----SQQPT 382
            .||.. .|..|:|.:........| |.|.|.|.|....:.|.||.....|:.|...    ....:
Zfish   321 EHATS-ACNSPLQHLASPDQYKSP-GTNPPRPGAFPGASSPGPVADLYGPTSQDSGVGNYISAAS 383

  Fly   383 PQPNFGTGYQQNYGGGPSKHNNMNANRMNPYSAGP------PNSYH 422
            |||..|.|:.                     .|||      .|.||
Zfish   384 PQPGSGFGHS---------------------IAGPLIATAFTNGYH 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	31/76 (41%)
		RRM2_hnRNPA_like	124..196	CDD:240774	31/71 (44%)
msi2b	NP_957403.1	RRM	<2..162	CDD:223796	60/141 (43%)
		RRM1_MSI	23..97	CDD:241020	29/73 (40%)
		RRM2_MSI	111..184	CDD:240769	31/72 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910