Protein Alignment Rb97D and Sxl

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Alignment Length: 556
• Identity: 116/556 - (20%)
• Similarity: 171/556 - (30%)
• Gaps: 203/556 - (36%)

  Fly    34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIID 98
            |.:..|....|:..|...:...|.:....:|||..|..|.|:.|:.:|..:...||.:    :::
  Fly   119 LIVNYLPQDMTDRELYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIK----VLN 179

  Fly    99 GKTVEAKR---ALPRPERES-RETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKT 159
            |.||..||   :..||..|| ::||     |:|..|.....::.|...|.::|::|...:|.||.
  Fly   180 GITVRNKRLKVSYARPGGESIKDTN-----LYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKL 239

  Fly   160 TGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQ 224
            ||:.||.|||.::                              .::|.|:.....|.:.|.
  Fly   240 TGRPRGVAFVRYN------------------------------KREEAQEAISALNNVIPE---- 270

  Fly   225 QQQQGGGQQP-------PNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPA 282
                 ||.||       .:|..:|..|.                  :.|...|.|.    ||||.
  Fly   271 -----GGSQPLSVRLAEEHGKAKAAHFM------------------SQMGVVPANV----PPPPP 308

  Fly   283 MPPYYQQPPPQQMNGWG--------------------------------------PY----PPPQ 305
            .||.:.......|:..|                                      ||    |..|
  Fly   309 QPPAHMAAAFNMMHRDGAMEKLRSLFDAICDAIFGLDSENFADLLDGLYRRKYHYPYLXLTPQQQ 373

  Fly   306 QN---------GWNAPPPPPPG------------AQQWHANQWGCPPPVQQVPPVGAVPPPMGHN 349
            |.         |:.:......|            .||:|..|       .|...:|.|   ..||
  Fly   374 QQLLQHQQQALGFTSSSNNSIGNGNGNDNNMLLYHQQYHQQQ-------TQQQRLGNV---AAHN 428

  Fly   350 GPPPTAPGNWNMPPP---------VPGAA------------PPSHQQQSSQQPTPQPN---FGTG 390
            ..|..:..|.|....         ..|.|            .|..||...|||...|:   |...
  Fly   429 ISPNGSNNNINTSNTNNINFNTIRQNGVAALHYLQEQLQLQQPQDQQSQQQQPLTMPSSPPFQQQ 493

  Fly   391 YQQNYGGGPS----------KHNNM---NANRMNPYSAGPPNSYHTPQPPAYTGYN-------AG 435
            .:|::..|.|          .:||.   |:|:.|.::....|........|.:|.|       :|
  Fly   494 SRQSHHNGSSSTLGNQLLAISNNNSFNNNSNQSNSFTGNYSNGSAFTSNGAISGSNFPNNPTSSG 558

  Fly   436 PLPPNGSVPPPT-----GAKAVGVSNGSVATGGSAN 466
            ....|.:...||     .:...|.||.:....||.|
  Fly   559 NFTNNSTNSNPTNSGHFASNLAGSSNFTNHLSGSNN 594

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	20/78 (26%)
		RRM2_hnRNPA_like	124..196	CDD:240774	17/71 (24%)
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	22/81 (27%)
		RRM2_Hu_like	203..281	CDD:240822	27/121 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.920