Protein Alignment Rb97D and CG12288

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Alignment Length: 277
• Identity: 62/277 - (22%)
• Similarity: 115/277 - (41%)
• Gaps: 63/277 - (22%)

  Fly    19 DREEDDICEL----EHLRKLFIGGLAPYTTE--ENLKLF--YGQWGKVVDVVVMRDAATK----- 70
            :::|:.:..:    |....:|:|.| |..|:  :.:|||  ||    :|..:.:|.|..|
  Fly   138 NKDEEGVKRIRNPAEEASTVFVGNL-PINTKRVQLVKLFQPYG----LVQSIRLRTAGGKQLFKH 197

  Fly    71 RSRGF-----GFITYTKSLMVDRA--------QENR----PHIIDGKTVEAKRALPRPERESRET 118
            :.|..     .::...|..:..:|        :||.    |..:..|..:||...| .:::::.|
  Fly   198 KQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQP-SDKDAKRT 261

  Fly   119 NISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILK 183
                  :|||.||.:..||.|||.|...|.:..::.|.|...| .:|.|:|.|...|||..|:..
  Fly   262 ------IFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALEL 319

  Fly   184 KQHAIKYVHVDVKK-SIYNLDKKEKQQPGGLANAIKPS----------------LNQQQQQQGGG 231
            .|..:....::|:: .:..|..|:.:.....:.|.|.|                |::::.::.|.
  Fly   320 NQTLLDDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGS 384

  Fly   232 ---QQPPNGNMQAPSFR 245
               :..|.|..:...:|
  Fly   385 LKKEGAPTGQKKKSEYR 401

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	24/71 (34%)
		RRM_SF	33..110	CDD:473069	23/102 (23%)
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	19/85 (22%)
		RRM_SF	261..332	CDD:473069	25/77 (32%)