Protein Alignment Rb97D and hnrnpa0b

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_999871.1
• Gene: hnrnpa0b / 334222
• ZFINID: ZDB-GENE-030131-6154
• Length: 314
• Species: Danio rerio
• Alignment Length: 430
• Identity: 124/430 - (28%)
• Similarity: 176/430 - (40%)
• Gaps: 123/430 - (28%)

  Fly    27 ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91
            |:|.|.|||:|||...||.:.|:.::.|:|.:.|.||:::...:|||.|||:||:.|...|.|..
Zfish     3 EMEKLCKLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADAAMA 67

  Fly    92 NRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLT 156
            .|||::|||.||.|||:.|.:....|....|||:|||||||:.:|:.|.|:|.|||.:...:::|
Zfish    68 ARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTEFFSQFGMIEKSEVIT 132

  Fly   157 DKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSL 221
            ||.|||:|||.||.|:|.|:.|||::.|.|.|....|:|||:   |.|:|.|..||....
Zfish   133 DKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKA---LTKQEIQAAGGARGG----- 189

  Fly   222 NQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPY 286
                :.:|||                    :.||               .|.|.:|
Zfish   190 ----RGRGGG--------------------RGMG---------------RNQNGFG--------- 206

  Fly   287 YQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHNGP 351
                 ..:..|:|.|......|:.                                    |::|.
Zfish   207 -----GGRGGGYGGYGGGYGGGYG------------------------------------GNDGG 230

  Fly   352 PPTAPGNWNMPPPVPGAAPPSHQQQSSQQ--PTPQPNFGTGY-QQNYGGGPSKHNNMNANRMNPY 413
            ...:.|:........|.....:.:|....  .....:||:|| ||:.|.||.|..|
Zfish   231 YGGSYGSGGYGGGYGGGYGGGYGEQMGGYGGGNDYSDFGSGYGQQSSGYGPMKGGN--------- 286

  Fly   414 SAGPPNSYHTPQPPAYTGYNAGPLPPNGSVPPPTGAKAVG 453
                          .|.|.:..|.|..|...|..|....|
Zfish   287 --------------TYGGRSGAPYPRGGGGGPGYGRGGYG 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	36/76 (47%)
		RRM2_hnRNPA_like	124..196	CDD:240774	36/71 (51%)
hnrnpa0b	NP_999871.1	RRM1_hnRNPA0	6..84	CDD:240772	36/77 (47%)
		RRM_SF	100..179	CDD:302621	41/81 (51%)
		HnRNPA1	263..294	CDD:288479	13/53 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	3	2.880