DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and Hrb87F

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_061503798.1 Gene:Hrb87F / 3290608 VectorBaseID:AGAMI1_011791 Length:362 Species:Anopheles gambiae


Alignment Length:421 Identity:158/421 - (37%)
Similarity:197/421 - (46%) Gaps:98/421 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLM 85
            ::|:|.|.|||||||||||...||::.||.::.:||||||||||:|..||||||||||||:||.|
Mosquito    18 DDDEIREPEHLRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYM 82

  Fly    86 VDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVV 150
            :|.||.:|||.|||:.||.|||:||.:....|...||||||||||:|:.|||.|||||.::|||:
Mosquito    83 IDDAQASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNVI 147

  Fly   151 SVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLD----KKEKQQPG 211
            |..::|||..||:|||.||||||||.|||.||:|.|.|:...:||||::...|    |.:..:.|
Mosquito   148 SACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHTIQNKLLDVKKALPKQDMDRYKNDMGRTG 212

  Fly   212 GLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYW 276
            |...             |||.....||.:.          ...|.:..|........        
Mosquito   213 GGGG-------------GGGGGGAWGNQRG----------SGGGGWNSQRGSGGGGG-------- 246

  Fly   277 GPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNA----------PPPPPPGAQQWH---ANQW- 327
                               .|||.......|.||:          ......|...|:   .|.| 
Mosquito   247 -------------------GGWGNQRGGAANDWNSGGFNNGGGFNNGGFNNGGNNWNNGGGNPWD 292

  Fly   328 -GCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGY 391
             ||....|     |.    .|:||      |||.......|.....::            ||..|
Mosquito   293 NGCGSQGQ-----GG----WGNNG------GNWGGNSGGGGGGWGGNE------------FGNNY 330

  Fly   392 QQNYGGGPSKHNNMNANRMNPYSAGPPNSYH 422
            ||.|..||.:.......|..||  |...||:
Mosquito   331 QQGYNAGPVRAGGNFNQRAAPY--GTDGSYY 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 45/71 (63%)
RRM_SF 33..110 CDD:473069 51/76 (67%)
Hrb87FXP_061503798.1 None

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