Protein Alignment Rb97D and hnrnpaba

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_997752.2
• Gene: hnrnpaba / 321466
• ZFINID: ZDB-GENE-030131-185
• Length: 340
• Species: Danio rerio
• Alignment Length: 333
• Identity: 99/333 - (29%)
• Similarity: 145/333 - (43%)
• Gaps: 59/333 - (17%)

  Fly     4 DEPLSDESAD--VIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRD 66
            |....|:.||  .|..:..|||       ..|:|:|||:..|::::||.::.::|:|.|..:..|
Zfish    46 DGTAGDDGADGGQIDASKGEED-------AGKMFVGGLSWDTSKKDLKDYFSKFGEVTDCTIKMD 103

  Fly    67 AATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLK 131
            ..|.||||||||.:.:...||:....:.|.:||:.::.|:|:...:.       .|||:|||||.
Zfish   104 PNTGRSRGFGFILFKEPSGVDKVLAQKEHRLDGRQIDPKKAMAMKKE-------PVKKIFVGGLN 161

  Fly   132 DNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK 196
            ....||.:||||..||.:.:::|..|..:.|||||.|:.|.:.:||.|.:.||.|.:.
Zfish   162 PETTEERIREYFGAFGEIETIELPMDPKSNKRRGFVFITFKEEEAVKKILEKKYHNVS------- 219

  Fly   197 KSIYNLDKKEKQQPGGLA--NAIKPSLNQQQQQQGG-----------GQQPPNGNMQAPSFRPPV 248
                  ..|:.....||.  ...:|....||||.||           |.|..|.|....::....
Zfish   220 ------GTKDTSGKEGLCEIKIAQPKEVYQQQQYGGRFGGGGRGRGRGGQGQNWNQGYNNYWNQG 278

  Fly   249 PPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPP 313
            ...|..|.|..|........ ..|::|.|       .||        .|:|.|...|.| .:...
Zfish   279 YGNQGYGGYGGQQGYGGYGG-YGNYDYSG-------GYY--------GGYGGYDYNQGN-TSYGK 326

  Fly   314 PPPPGAQQ 321
            .|..||.|
Zfish   327 TPRRGAHQ 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	29/71 (41%)
		RRM_SF	33..110	CDD:473069	28/76 (37%)
hnrnpaba	NP_997752.2	CBFNT	1..69	CDD:311868	8/29 (28%)
		RRM1_hnRNPAB	65..144	CDD:410151	30/85 (35%)
		RRM2_hnRNPAB	149..228	CDD:409997	32/98 (33%)