DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rb97D and HNRNPA2B1

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens


Alignment Length:458 Identity:145/458 - (31%)
Similarity:199/458 - (43%) Gaps:135/458 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91
            |.|..||||||||:..||||:|:.:|.||||:.|.|||||.|:||||||||:|::....||.|..
Human    16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80

  Fly    92 NRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLT 156
            .|||.|||:.||.|||:.|.|......:::||||||||:|::.:|..||:||.::|.:.:::::|
Human    81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIIT 145

  Fly   157 DKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQP----GGLANAI 217
            |:.:||:|||.||.|||:|.|||.:|:|.|.|...:.:|:|::...:.:|.|..    ||.... 
Human   146 DRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFGF- 209

  Fly   218 KPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPPPPA 282
                   ...:|||     ||.                            .|.|..|:.|    .
Human   210 -------GDSRGGG-----GNF----------------------------GPGPGSNFRG----G 230

  Fly   283 MPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVPPVGAVPPPMG 347
            ...|      ....|:|       :|:|.....|.|     .|..|.|                |
Human   231 SDGY------GSGRGFG-------DGYNGYGGGPGG-----GNFGGSP----------------G 261

  Fly   348 HNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNYGGGPSKHNNMNANRMNP 412
            :.|    ..|.:       |...|.:..|..       .:|.|| .|||||  .:.:.|.|....
Human   262 YGG----GRGGY-------GGGGPGYGNQGG-------GYGGGY-DNYGGG--NYGSGNYNDFGN 305

  Fly   413 YSAGPPNSYHTPQPPA-----------YTGYNAGPLPPNGSVPPPTGAKAVGVSNGSVATGGSAN 466
            |:..|.|  :.|....           |.|.|.||                |.|.||...||  .
Human   306 YNQQPSN--YGPMKSGNFGGSRNMGGPYGGGNYGP----------------GGSGGSGGYGG--R 350

  Fly   467 SKY 469
            |:|
Human   351 SRY 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 33/71 (46%)
RRM_SF 33..110 CDD:473069 47/76 (62%)
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15
RRM1_hnRNPA2B1 19..99 CDD:410155 48/79 (61%)
RRM2_hnRNPA2B1 112..191 CDD:409995 36/78 (46%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 55/279 (20%)
HnRNPA1 302..326 CDD:463312 4/25 (16%)
Nuclear targeting sequence. /evidence=ECO:0000250 308..347 12/56 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.