Protein Alignment Rb97D and Hnrnpa1

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_006242446.1
• Gene: Hnrnpa1 / 29578
• RGDID: 69234
• Length: 373
• Species: Rattus norvegicus
• Alignment Length: 470
• Identity: 134/470 - (28%)
• Similarity: 199/470 - (42%)
• Gaps: 138/470 - (29%)

  Fly    27 ELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQE 91
            |.|.|||||||||:..||:|:|:..:.|||.:.|.|||||..|||||||||:||.....||.|..
  Rat     9 EPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMN 73

  Fly    92 NRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLT 156
            .|||.:||:.||.|||:.|.:.:....:::|||:||||:|::.:|..||:||.|:|.:..::::|
  Rat    74 ARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMT 138

  Fly   157 DKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSL 221
            |:.:||:||||||.|||:|:|||.:::|.|.:...:.:|:|:   |.|:|      :|:|    .
  Rat   139 DRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA---LSKQE------MASA----S 190

  Fly   222 NQQQQQQG--------GGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFN---- 274
            :.|:.:.|        ||....|.|.....                            ||:
  Rat   191 SSQRGRSGSGNFGGGRGGGFGGNDNFGRGG----------------------------NFSGRGG 227

  Fly   275 ---------YWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCP 330
                     |.|             .....||:|     ...|:....|...|..:.:
  Rat   228 FGGSRGGGGYGG-------------SGDGYNGFG-----NDGGYGGGGPGYSGGSRGY------- 267

  Fly   331 PPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNY 395
                     |:.....|:.|......|:::......|..                .||.|...|:
  Rat   268 ---------GSGGQGYGNQGSGYGGSGSYDSYNNGGGGG----------------GFGGGSGSNF 307

  Fly   396 GGGPS-----KHNNMNANRMNPYSAGPPNSYHTPQPPAYTGYNAGPLPPNGS-VPPPTGAKAVGV 454
            |||.|     .:||.::| ..|...|           .:.|.::||....|. ...|......|
  Rat   308 GGGGSYNDFGNYNNQSSN-FGPMKGG-----------NFGGRSSGPYGGGGQYFAKPRNQGGYG- 359

  Fly   455 SNGSVATGGSANSKY 469
                   |.|::|.|
  Rat   360 -------GSSSSSSY 367

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	44/76 (58%)
		RRM2_hnRNPA_like	124..196	CDD:240774	32/71 (45%)
Hnrnpa1	XP_006242446.1	RRM1_hnRNPA1	12..92	CDD:410154	46/79 (58%)
		RRM2_hnRNPA3	105..184	CDD:409996	36/81 (44%)
		HnRNPA1	308..345	CDD:402981	12/48 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	82	1.000	Domainoid score	I8203
eggNOG	1	0.900	-	-		E33208_3BA81
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	1	1.000	-	-		FOG0000779
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X431
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	6.820