Protein Alignment Rb97D and rnp-9

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001359585.1
• Gene: rnp-9 / 182350
• WormBaseID: WBGene00007396
• Length: 312
• Species: Caenorhabditis elegans
• Alignment Length: 282
• Identity: 61/282 - (21%)
• Similarity: 107/282 - (37%)
• Gaps: 85/282 - (30%)

  Fly    34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIID 98
            :|:|.|:...:.|.||..:.::|:|.:..|:||..|::|:|:||:::...    :..||....::
 Worm    89 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNK----QNAENAIAGMN 149

  Fly    99 GKTVEAKRAL-----PRPERESRETNISVKKLF-----------VGGLKDNHDEECLREYFLQFG 147
            ||.: .|||:     .|...|.....::.:::|           ||.:.....:..||:.|..:|
 Worm   150 GKWI-GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDLFSTYG 213

  Fly   148 NVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGG 212
            ::..|::.      |.:.:|||.::..:...|||                    ::...|:..|
 Worm   214 DIAEVRIF------KTQRYAFVRYEKKECATKAI--------------------MEMNGKEMAG- 251

  Fly   213 LANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQ------QQPPPAPMSAP-- 269
                     ||.:...|..|..||               ||:.|..      ..|...|.:.|
 Worm   252 ---------NQVRCSWGRTQAVPN---------------QALNPLPIDLSSLMMPTMLPTTIPLI 292

  Fly   270 -PPNFNYWGPPPPAMPPYYQQP 290
             .|..||    .||...|...|
 Worm   293 QNPFLNY----EPATLLYSSFP 310

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	15/82 (18%)
		RRM_SF	33..110	CDD:473069	23/80 (29%)
rnp-9	NP_001359585.1	RRM2_TIA1_like	88..162	CDD:409789	23/77 (30%)
		RRM_SF	189..259	CDD:473069	18/105 (17%)