Protein Alignment Rb97D and hrpa-2

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_741783.1
• Gene: hrpa-2 / 180791
• WormBaseID: WBGene00019249
• Length: 336
• Species: Caenorhabditis elegans
• Alignment Length: 239
• Identity: 77/239 - (32%)
• Similarity: 119/239 - (49%)
• Gaps: 43/239 - (17%)

  Fly    31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPH 95
            |||||||||:..||:|.|..::.|||.|||.:|:||..||.||||||:|:......:.|..:|||
 Worm    69 LRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMNDRPH 133

  Fly    96 IIDGKTVEAKRALPRPERESR------ETNISVK-KLFVGGLKDN-HDEECLREYFLQFGNVVSV 152
            .:.||||::|||:||.:..|.      ||:.:.. ||.:.|:.:. |..:.||.||..||.:..|
 Worm   134 KLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFETFGTLDQV 198

  Fly   153 KLLTDKTTGKRRGFAFVEFDDYDAVDKAILKK--QHAIKYVHVDVK-------KSIY-------- 200
            ::|     |:.||..||.::|.::.|:.:...  :|.:....::|:       .|.|
 Worm   199 EIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHPNGSTYWKRPQSQS 258

  Fly   201 -------------NLDKKEKQQPGGLANAIKPSLNQQQQQQGGG 231
                         ||...:::..|..::|.....|..:....||
 Worm   259 HSQRDLFEQLSQLNLKDGDRKSTGNSSSAADTPQNFDEDSNYGG 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	40/76 (53%)
		RRM2_hnRNPA_like	124..196	CDD:240774	20/74 (27%)
hrpa-2	NP_741783.1	RRM	<62..230	CDD:223796	66/165 (40%)
		RRM1_hnRNPA_like	71..148	CDD:241022	40/76 (53%)
		RRM_SF	183..240	CDD:302621	17/61 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	84	1.000	Domainoid score	I5263
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910