Protein Alignment Rb97D and hrpa-1

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_001040945.1
• Gene: hrpa-1 / 177101
• WormBaseID: WBGene00001999
• Length: 347
• Species: Caenorhabditis elegans
• Alignment Length: 405
• Identity: 135/405 - (33%)
• Similarity: 185/405 - (45%)
• Gaps: 92/405 - (22%)

  Fly    13 DVIVLADREEDDI-CELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFG 76
            ||.:.|:....|. .|.|:|||:|:|||...||::.::.||.|:|::.|::||||..||||||||
 Worm     3 DVEIKAENGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFG 67

  Fly    77 FITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLRE 141
            |:|::....||.|.:.||||||||||:.|||:||.::...|:|:|.|:|:|.|::::|.|:.|.|
 Worm    68 FVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTE 132

  Fly   142 YFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKE 206
            ||.::|.|...:::.||.|.|.|||.||.|||:|:||:.:|:|.|.:.....||:|   .|.|.|
 Worm   133 YFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRK---GLSKDE 194

  Fly   207 KQQPGGLANAIKPSLNQQQQQQGG----GQQ-------PPNGNMQAPSFRPPVPPQQAMGPYQQQ 260
            ..         |..:|:.::.:||    ||:       ...|....|:        |..||....
 Worm   195 MS---------KAQMNRDRETRGGRSRDGQRGGYNGGGGGGGGWGGPA--------QRGGPGAYG 242

  Fly   261 PPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPG---AQQW 322
            .|...........||.|                   |||......|.||..|.....|   .||.
 Worm   243 GPGGGGQGGYGGGNYGG-------------------GWGQQGGGGQGGWGGPQQQQGGGGWGQQG 288

  Fly   323 HANQ--WGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQP 385
            ...|  ||.|   ||....|...|..|..|      |.|.
 Worm   289 GGGQGGWGGP---QQQQQGGWGGPQQGGGG------GGWG------------------------- 319

  Fly   386 NFGTGYQQNYGGGPS 400
              |.|.||...||.|
 Worm   320 --GQGQQQGGWGGQS 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	30/71 (42%)
		RRM_SF	33..110	CDD:473069	42/76 (55%)
hrpa-1	NP_001040945.1	RRM_SF	24..101	CDD:473069	42/76 (55%)
		RRM2_hnRNPA_like	115..187	CDD:409766	30/71 (42%)