Sequence 1: | NP_001014671.1 | Gene: | Rb97D / 43231 | FlyBaseID: | FBgn0004903 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001254189.1 | Gene: | tdp-1 / 174436 | WormBaseID: | WBGene00006514 | Length: | 414 | Species: | Caenorhabditis elegans |
Alignment Length: | 281 | Identity: | 68/281 - (24%) |
---|---|---|---|
Similarity: | 116/281 - (41%) | Gaps: | 63/281 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENR----- 93
Fly 94 PHIIDGKTVEAK----RALPRPERESRETNISVKKLFVGGLKDNHDEECLREYF-LQFGNVVSVK 153
Fly 154 LLTDKTTGKR-RGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPG---GLA 214
Fly 215 NAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPP 279
Fly 280 PPAMPPYYQQPPPQQMNGWGP 300 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rb97D | NP_001014671.1 | RRM1_hnRNPA_like | 33..110 | CDD:241022 | 23/84 (27%) |
RRM2_hnRNPA_like | 124..196 | CDD:240774 | 22/73 (30%) | ||
tdp-1 | NP_001254189.1 | RRM_SF | 174..247 | CDD:302621 | 21/77 (27%) |
RRM_SF | 262..339 | CDD:302621 | 23/78 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |