DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and EEED8.4

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_495022.2 Gene:EEED8.4 / 173921 WormBaseID:WBGene00017135 Length:191 Species:Caenorhabditis elegans


Alignment Length:83 Identity:26/83 - (31%)
Similarity:46/83 - (55%) Gaps:2/83 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 KTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRR 164
            |.:|:...:|..|.|.:.  |..|.:|:|.:..|...|.:.|:|...|.:|...:..||.|.|::
 Worm    34 KHLESAAYVPPTEEEQKA--IDAKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQK 96

  Fly   165 GFAFVEFDDYDAVDKAIL 182
            .||::||||..:::.|::
 Worm    97 NFAYIEFDDSSSIENALV 114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 19/59 (32%)
RRM_SF 33..110 CDD:473069 2/9 (22%)
EEED8.4NP_495022.2 RRM_II_PABPs 56..128 CDD:409747 19/59 (32%)

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