DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and DAZL

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens


Alignment Length:262 Identity:68/262 - (25%)
Similarity:97/262 - (37%) Gaps:79/262 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVE-FDDYDAVDKA 180
            |..|....:||||:....||..:|.:|.::|:|..||::||: ||..:|:.||. |:|.| |.|.
Human    54 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVD-VQKI 116

  Fly   181 I----------------LKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQG 229
            :                ::||:...| ||..:..::|                            
Human   117 VESQINFHGKKLKLGPAIRKQNLCAY-HVQPRPLVFN---------------------------- 152

  Fly   230 GGQQPPNGNMQ----APSFRPPVPPQQAMGP---YQQQPPPAPMSAPPPNFNYWGPPPPAMPPYY 287
               .||....|    .|:....:.|...|.|   |.|..|..|.|.......|      .:|.|.
Human   153 ---HPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGY------QLPVYN 208

  Fly   288 QQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVP---PVGAVPPPMGHN 349
            .|.|||       :|..:|..:..  ||...|..:|.|:  ..|..:.||   .|....||.| |
Human   209 YQMPPQ-------WPVGEQRSYVV--PPAYSAVNYHCNE--VDPGAEVVPNECSVHEATPPSG-N 261

  Fly   350 GP 351
            ||
Human   262 GP 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 29/88 (33%)
RRM_SF 33..110 CDD:473069
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:410073 25/82 (30%)
PABP-1234 <60..228 CDD:130689 52/216 (24%)
Blue background indicates that the domain is not in the aligned region.

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