DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and DAZ1

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:NP_004072.3 Gene:DAZ1 / 1617 HGNCID:2682 Length:744 Species:Homo sapiens


Alignment Length:563 Identity:119/563 - (21%)
Similarity:177/563 - (31%) Gaps:214/563 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIID 98
            :|:||:.....|..:...:|::|.|.:|.::.: .|..|:|:||:::...:.|.:...::.| ..
Human   207 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITN-RTGVSKGYGFVSFVNDVDVQKIVGSQIH-FH 269

  Fly    99 GKTVE-----------AKRALPRP----------------------------------------- 111
            ||.::           |:...|||                                         
Human   270 GKKLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAA 334

  Fly   112 ---------ERESR---------------ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSV 152
                     .||:.               |..|....:||||:....||..:...|.::|:|..|
Human   335 NPETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEV 399

  Fly   153 KLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKK----SIYNLDKKEKQQPGGL 213
            |::|:: ||..:|:.||.|.:                  .|||:|    .|:...||.|      
Human   400 KIITNR-TGVSKGYGFVSFVN------------------DVDVQKIVGSQIHFHGKKLK------ 439

  Fly   214 ANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNF-NYWG 277
               :.|::.:|:             :.|...:|        .|....||      |||.| |.|.
Human   440 ---LGPAIRKQK-------------LCARHVQP--------RPLVVNPP------PPPQFQNVWR 474

  Fly   278 PP------PPAMPPYYQQPPPQQMNGWGPYP-PPQQ---------NGWNAPPPPPPGAQQWHANQ 326
            .|      .|.:.|   .|..|.:..:..|| .|.|         ..:...|..|..|.|...  
Human   475 NPNTETYLQPQITP---NPVTQHVQAYSAYPHSPGQVITGCQLLVYNYQEYPTYPDSAFQVTT-- 534

  Fly   327 WGCPPPVQQVPPVGAVPP-------------------PMGHNGPPPTAPGNWNMP----PPVPGA 368
             |...||....|..|.|.                   |...|.|...|.| :..|    .|.| |
Human   535 -GYQLPVYNYQPFPAYPRSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATG-YQFPVYNYQPFP-A 596

  Fly   369 APPSHQQQSSQQPTPQPNF-------------GTGYQ---QNYGGGPSKHNN------------M 405
            .|.|..|.::....|..|:             .||||   .||...|:..|:            .
Human   597 YPSSPFQVTAGYQLPVYNYQAFPAYPNSPFQVATGYQFPVYNYQAFPAYPNSPVQVTTGYQLPVY 661

  Fly   406 NANRMNPYSAGPPNSYHTPQPPAYTGYNAGPLPPNGSVPPPTG 448
            |......|.:.|.......|.|.| .|.|.|..||.:|...||
Human   662 NYQAFPAYPSSPFQVTTGYQLPVY-NYQAFPAYPNSAVQVTTG 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 20/71 (28%)
RRM_SF 33..110 CDD:473069 18/86 (21%)
DAZ1NP_004072.3 RRM_DAZL 35..116 CDD:410073
PABP-1234 42..603 CDD:130689 94/460 (20%)
RRM_DAZL 200..281 CDD:410073 17/75 (23%)
RRM_DAZL 365..446 CDD:410073 28/108 (26%)
Daz 596..616 CDD:465893 6/19 (32%)
Daz 620..640 CDD:465893 5/19 (26%)
Daz 644..664 CDD:465893 2/19 (11%)
Daz 668..688 CDD:465893 5/20 (25%)
Daz 692..712 CDD:465893 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

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