DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and Rbp6

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_061499213.1 Gene:Rbp6 / 1277242 VectorBaseID:AGAMI1_006135 Length:383 Species:Anopheles gambiae


Alignment Length:424 Identity:117/424 - (27%)
Similarity:161/424 - (37%) Gaps:99/424 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRS------------------RGFGFIT 79
            |:|||||:..|:.|:|:.::.::|::.:|:||:|..|:||                  |||||||
Mosquito    25 KMFIGGLSWQTSPESLRDYFSKFGEITEVMVMKDPTTRRSSSSAMGLADSSAPLYSRPRGFGFIT 89

  Fly    80 YTKSLMVDRAQENRPHIIDGKTVEAKRALPR---PERESRETNISVKKLFVGGLKDNHDEECLRE 141
            :.....||:...:..|.:|||.::.|.|.||   |:..:|     .||:|||||......|.::.
Mosquito    90 FGDPASVDKVLAHGTHELDGKKIDPKVAFPRRAHPKMVTR-----TKKIFVGGLSAPTTLEDVKS 149

  Fly   142 YFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKE 206
            ||.|||.:....|:.||.|.:.|||.||.|...|.|||......|.|....|:.||:    ..||
Mosquito   150 YFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKA----QPKE 210

  Fly   207 KQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPP 271
            ...|..||         :.:..|.|..         .|      ..::|......|.|..:|...
Mosquito   211 VMLPANLA---------KTRTAGRGTY---------DF------MWSLGTLPDGFPAAAYAAYAA 251

  Fly   272 NFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQ-QNGWNAPPPPPPGAQQWHA---NQWGCPPP 332
            ...:.|.|...:                |||... .||...|....|...|..:   |.......
Mosquito   252 GRGFSGYPSFGL----------------PYPTVDITNGQLTPNNNTPLLTQALSVMNNYQAAAAA 300

  Fly   333 VQQVPPVGAVPPPMGHNGPPPTAPG--NWNMPPPV------PGAAPPSHQQQSSQQPTPQPNFGT 389
            ..|    |..||...|.....||.|  |.|.|.|.      ..|....:.|.:|.||:..|....
Mosquito   301 AAQ----GFGPPASPHTTTTRTAAGFPNANSPGPTIDMYSSSAADSVGYVQATSPQPSGFPAIAV 361

  Fly   390 GYQQ-NYGGGPSKHNNMNANRMNPYSAGPPNSYH 422
            .... ||..|          ::.|  |...|.||
Mosquito   362 SRAPLNYSPG----------QLIP--AAFTNGYH 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 29/71 (41%)
RRM_SF 33..110 CDD:473069 32/94 (34%)
Rbp6XP_061499213.1 None

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