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Protein Alignment Rb97D and Pabp2
DIOPT Version :10
| Sequence 1: | NP_524520.1 |
Gene: | Rb97D / 43231 |
FlyBaseID: | FBgn0004903 |
Length: | 471 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_061498749.1 |
Gene: | Pabp2 / 1274794 |
VectorBaseID: | AGAMI1_009745 |
Length: | 221 |
Species: | Anopheles gambiae |
| Alignment Length: | 95 |
Identity: | 21/95 - (22%) |
| Similarity: | 42/95 - (44%) |
Gaps: | 7/95 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
:..:..:.::||.:......|.|..:|...|.:..|.:|.:|..|..:|||::||...:.|:.|:
Mosquito 87 KAEVDNRSIYVGNVDYGATAEELEAHFHGCGAINRVTILCNKADGHPKGFAYIEFGSKEFVETAL 151
Fly 182 LKKQHAIKYVHVDVKKSIYNLDKKEKQQPG 211
...:...:...:.| :.|...:||
Mosquito 152 AMNETLFRGRQIKV-------NPKRTNRPG 174
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rb97D | NP_524520.1 |
RRM2_hnRNPA_like |
124..196 |
CDD:409766 |
17/71 (24%) |
| RRM_SF |
33..110 |
CDD:473069 |
|
| Pabp2 | XP_061498749.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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