DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rb97D and LOC1271847

DIOPT Version :10

Sequence 1:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster
Sequence 2:XP_310701.6 Gene:LOC1271847 / 1271847 VectorBaseID:AGAMI1_013298 Length:398 Species:Anopheles gambiae


Alignment Length:464 Identity:107/464 - (23%)
Similarity:150/464 - (32%) Gaps:180/464 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 REEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSL 84
            |::|        ||||:|||:..|:::.||..:.|:|.:..:.|..|..|.|||||.||.|..:.
Mosquito    98 RDDD--------RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSAD 154

  Fly    85 MVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNV 149
            .:|:......|:|:.|.|:.|:|..|           ..|:|||||.....:|.::.:|.||||:
Mosquito   155 SIDKVVAVSEHVINNKKVDPKKAKAR-----------YGKIFVGGLTSEISDEEIKTFFGQFGNI 208

  Fly   150 VSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLA 214
            |.|::..||...:|:||.|:.||....|::.:...:..|....|||||:   ..|.|...|.|  
Mosquito   209 VEVEMPFDKQKNQRKGFCFITFDSEQVVNELLKTPKQTISGKEVDVKKA---TPKPENMGPMG-- 268

  Fly   215 NAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYWGPP 279
                        ..||     .|.|:                                    |||
Mosquito   269 ------------PMGG-----RGGMR------------------------------------GPP 280

  Fly   280 PPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPG-AQQWHANQWGCPPPVQQVPPVGAVP 343
            |..|                      :.|...|..|..| .|.|....:|               
Mosquito   281 PRGM----------------------RGGRGGPGGPKGGYGQGWGGQGYG--------------- 308

  Fly   344 PPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNYGGGPSK------- 401
                                                        |.||.|.||||...       
Mosquito   309 --------------------------------------------GYGYGQGYGGGYGDYGYDYLA 329

  Fly   402 -----HNNMNANRMNPYSAGPPNSYHTPQPPAYTGYNAGPLPPNGSVPPPTGAKAVGVSNGSVAT 461
                 :||...:....|..   :.|      .|.||:.|.:...|....|.|.|..|...|....
Mosquito   330 RWYGGYNNGGYDLSGGYYG---DDY------GYGGYDGGYMNGGGRPGGPRGGKGAGAYGGGKQR 385

  Fly   462 GGSANSKYR 470
            |.|...:.|
Mosquito   386 GNSGGRQQR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 26/71 (37%)
RRM_SF 33..110 CDD:473069 29/76 (38%)
LOC1271847XP_310701.6 None

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