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Protein Alignment Rb97D and Pabpn1
DIOPT Version :10
| Sequence 1: | NP_524520.1 |
Gene: | Rb97D / 43231 |
FlyBaseID: | FBgn0004903 |
Length: | 471 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_063129984.1 |
Gene: | Pabpn1 / 116697 |
RGDID: | 619928 |
Length: | 320 |
Species: | Rattus norvegicus |
| Alignment Length: | 55 |
Identity: | 19/55 - (34%) |
| Similarity: | 32/55 - (58%) |
Gaps: | 0/55 - (0%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 123 KKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAV 177
:.::||.:......|.|..:|...|:|..|.:|.||.:|..:|||::||.|.::|
Rat 168 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESV 222
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Rb97D | NP_524520.1 |
RRM2_hnRNPA_like |
124..196 |
CDD:409766 |
19/54 (35%) |
| RRM_SF |
33..110 |
CDD:473069 |
|
| Pabpn1 | XP_063129984.1 |
None |
|
Blue background indicates that the domain is not in
the aligned region.
|
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