Protein Alignment Rb97D and msi2

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_004911774.1
• Gene: msi2 / 100038158
• XenbaseID: XB-GENE-488852
• Length: 407
• Species: Xenopus tropicalis
• Alignment Length: 417
• Identity: 117/417 - (28%)
• Similarity: 169/417 - (40%)
• Gaps: 95/417 - (22%)

  Fly    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHII 97
            |:|||||:..|:.::|:.::.::|::.:.:||||..|||||||||:|:.....||:......|.:
 Frog    22 KMFIGGLSWQTSPDSLRDYFNKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLAQPHHEL 86

  Fly    98 DGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGK 162
            |.||::.|.|.||..:....|.  .||:|||||..|...|.:::||.|||.|....|:.||||.:
 Frog    87 DSKTIDPKVAFPRRAQPKMVTR--TKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNR 149

  Fly   163 RRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPG--GLANAIKPSLNQQQ 225
            .|||.||.|:..|.|:|......|.|....|:.||:   ..|:....||  |.|..:..:::...
 Frog   150 HRGFGFVTFEIEDVVEKVCEIHFHEINNKMVECKKA---QPKEVMFPPGTRGRARGLPYTMDAFM 211

  Fly   226 QQQG-----------GGQQP---PNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPPPNFNYW 276
            ...|           |...|   |:.:.|.|.|    |...|.||.......|...:..|::.::
 Frog   212 LGMGMLGYPNFVATYGRGYPGFAPSYSYQFPGF----PAAAAYGPVAAAAVAAARGSGIPDYGFY 272

  Fly   277 ------------------GPPPPAM-----------PPYYQQPPPQQMNGWGPYPPPQQNGWNAP 312
                              ||....|           .|.:..|.|.|...     |...|.::|.
 Frog   273 TTPGDQRATLSFADYGSMGPRTAQMLRSEHAASASNSPLHHLPSPDQFKS-----PAVLNSYSAQ 332

  Fly   313 PPPPPGAQQWHANQWGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNW---NMPPPVPG----AAP 370
            |            .:|.|     ..|.||          .|..||.:   |.|.||..    |:.
 Frog   333 P------------NYGAP-----ASPAGA----------NPARPGGFPGANSPGPVADLYGTASQ 370

  Fly   371 PSHQQQSSQQPTPQPNFGTGYQQNYGG 397
            .|.........:|||  |:|:.....|
 Frog   371 DSGVGNYISAASPQP--GSGFSHGIAG 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	31/71 (44%)
		RRM_SF	33..110	CDD:473069	31/76 (41%)
msi2	XP_004911774.1	RRM1_MSI2	17..109	CDD:410153	34/88 (39%)
		RRM2_MSI	111..184	CDD:240769	31/72 (43%)