DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and Spock3

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_006509579.1 Gene:Spock3 / 72902 MGIID:1920152 Length:452 Species:Mus musculus


Alignment Length:341 Identity:76/341 - (22%)
Similarity:126/341 - (36%) Gaps:61/341 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 WLLLGLGLLAVSHVQASTEFSEDLLDEDLDLSDIDENEEEFLRLLEEKNKIKDIERENEIAT-KL 68
            |....|...|...|........:.|||...|:.|.:.::|    :.:.||.:|...::...| ..
Mouse    31 WCSQTLAAAAAVAVAGGRSDGGNFLDEKQWLTTISQYDKE----VGQWNKFRDEVEDDYFRTWNP 91

  Fly    69 AEVQHNLLNPVVEVDLCETMSCGAGRICQMHDEK---------------------------PKCV 106
            .:.....|:|.  .|.|....|...::|...|.:                           |...
Mouse    92 GKPFDQALDPA--KDPCLKTKCSRHKVCITQDAQTALCISHRRLTHSMKEVGGSHKQWRGLPSST 154

  Fly   107 CIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRC--------WCDSGEPGCTNPDNAHMHIDYYG 163
            |.| ||  :.....||.:...::.|.|.:..|.|        .|   |..|..|.:..|:|    
Mouse   155 CKP-CP--IAYASPVCGSDGHSYSSQCKLEYQACVLGKQISIKC---EGRCPCPSDKSMNI---- 209

  Fly   164 ACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQMELEA-ETNNSRRWSNAAVWKW 227
            ..:..|:|...:.::...|:||| |..:.:...:::.|:..::.|... :|:......::..|.:
Mouse   210 GRNVKRACSDLEFREVANRLRDW-FKALHESGSQNKKTKALLRPERSRFDTSILPICKDSLGWMF 273

  Fly   228 CDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACL--ELDPEDLKE 290
            ..||.:.|..:.:.||..|.  |...|.|...|..|||:.||..|:..||..|.  :.||....|
Mouse   274 NRLDTNYDLLLDQSELGSIY--LDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCHTE 336

  Fly   291 RCDDVQRAQ--PHLLG 304
             ..::|:.|  ..|||
Mouse   337 -LSNIQKRQGIKKLLG 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 21/117 (18%)
SPARC_Ca_bdg 169..278 CDD:287550 28/109 (26%)
SPARC_EC 170..292 CDD:238155 32/124 (26%)
Spock3XP_006509579.1 Kazal_2 153..201 CDD:369449 13/53 (25%)
EFh_SPARC_TICN3 217..329 CDD:320018 29/114 (25%)
EF-hand motif 265..296 CDD:320018 8/32 (25%)
EF-hand motif 297..327 CDD:320018 12/29 (41%)
TY 332..396 CDD:238114 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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