DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and sparcl1

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001124077.1 Gene:sparcl1 / 567331 ZFINID:ZDB-GENE-060130-6 Length:606 Species:Danio rerio


Alignment Length:380 Identity:96/380 - (25%)
Similarity:148/380 - (38%) Gaps:120/380 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QASTEFSEDLLDEDLDLSDIDENEEEFLRLLE-------------EKNKIKD------------- 57
            ||..|..|.  :.|::....|:.:|:  .:||             :||:.|.             
Zfish   231 QAQEELKEP--ENDIEKGKNDQQDEK--NILEPGISEGKMAKKDKKKNESKSNGKGKGKKQRNSE 291

  Fly    58 ------------IERENEIA-----TKLAEVQHNL----------------LNPV---------- 79
                        ||...|:|     .|:.|...|.                :|||          
Zfish   292 LLEKMQSDQAGAIEDTEELAQKKDQEKVTEATENTESKPRKKNGKWTRLVGMNPVQIRATMDLYP 356

  Fly    80 ------------VEVDLCETMSCGAGRICQMHDE-KPKCVC--IPECPEEVDTRRLVCTNTNETW 129
                        |..|.||...|..|:.|:::|| ||.|||  ..|||..|:....||...|:|:
Zfish   357 DVRLTRHSNGQGVPADPCENFRCKRGKTCKLNDENKPLCVCQEPTECPPNVNDFEHVCGTDNKTY 421

  Fly   130 PSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDL 194
            .|.|.::..:|..:..:.|      ..:|:||.|:|.....|...:|..||.||||||.||:..|
Zfish   422 DSSCHLFATKCGLEGTKLG------HRLHLDYTGSCKFIAPCVESELVQFPLRMRDWLKNVLLQL 480

  Fly   195 AERDELTEHYM--------QMELEAE-----------------TNNSRRWSNAAVWKWCDLD-GD 233
            .|.|.::..::        |...|:|                 ..|...:.....|::..:| ..
Zfish   481 YEHDSMSPGFLTAKQRIRVQKIYESERRLHAGDHPVEILQQDFEKNYNMYIYPVHWQFAQMDQHP 545

  Fly   234 TDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLELDPEDL 288
            :||.::..||.|:|.|||.:|||.:.|.:.||::||..::..||.:|..:..||:
Zfish   546 SDRFLTHSELAPLRVPLVPMEHCTSVFFQMCDADKDKLVSFKEWCSCFGIKEEDM 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 29/85 (34%)
SPARC_Ca_bdg 169..278 CDD:287550 39/134 (29%)
SPARC_EC 170..292 CDD:238155 43/145 (30%)
sparcl1NP_001124077.1 MDN1 <38..332 CDD:331582 19/104 (18%)
KAZAL_FS 373..454 CDD:320757 29/86 (34%)
EFh_SPARC_EC 457..597 CDD:330171 41/139 (29%)
EF-hand motif 530..562 CDD:320009 8/31 (26%)
EF-hand motif 565..595 CDD:320009 11/29 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594918
Domainoid 1 1.000 73 1.000 Domainoid score I9203
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528521at2759
OrthoFinder 1 1.000 - - FOG0003487
OrthoInspector 1 1.000 - - otm26401
orthoMCL 1 0.900 - - OOG6_105759
Panther 1 1.100 - - LDO PTHR13866
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2378
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.710

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