DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and spock3

DIOPT Version :10

Sequence 1:NP_651509.2 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001314916.1 Gene:spock3 / 562002 ZFINID:ZDB-GENE-090311-24 Length:387 Species:Danio rerio


Alignment Length:235 Identity:49/235 - (20%)
Similarity:83/235 - (35%) Gaps:62/235 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DLCETMSCGAGRICQMHD-EKPKCV------------------CIPECPEEVDTRRLVCTNTNET 128
            |.|..:.||..::|...| :.|.||                  | ..||  |.....:|.....|
Zfish    62 DPCLKIKCGRHKVCVAEDYQTPTCVSQRRMSFKDMNLNSPLLKC-KRCP--VVHPSPICGTDGHT 123

  Fly   129 WPSDCSVYQQ--------------RCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDF 179
            :.:.|.:..|              :|.|..|.|.                  |.|.|...::.:.
Zfish   124 YSTKCKLEYQACISGKQISVKCPGQCPCAPGNPA------------------EKRECGNAEMTEV 170

  Fly   180 PRRMRDWLFNVMRDLAERDELTEHYMQMELEAETNNSR--RWSNAAVWKWCDLDGDTDRSVSRHE 242
            ..|:|:|:    ..|.|.....:.|...:.|.:.:.|:  ...::..|.:..||.:.|..:.:.|
Zfish   171 VSRLREWI----TVLHESGNTNKKYKFQKPEKKVDMSKVPLCKDSLGWMFSRLDTNFDLHLDQSE 231

  Fly   243 LFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLE 282
            |..:.:.  ..:.|...||.|||.|:|..::..||.:|.:
Zfish   232 LSSLNSE--KSDVCTKAFLRSCDPNRDRLVSSQEWCSCFQ 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_651509.2 FSL_SPARC 85..168 CDD:238649 20/115 (17%)
EFh_SPARC_like 171..285 CDD:320010 26/114 (23%)
EF-hand motif 219..251 CDD:320010 6/31 (19%)
EF-hand motif 253..285 CDD:320010 11/30 (37%)
spock3NP_001314916.1 KAZAL 106..149 CDD:197624 7/44 (16%)
EFh_SPARC_TICN 162..272 CDD:320011 26/114 (23%)
EF-hand motif 208..239 CDD:320011 6/32 (19%)
EF-hand motif 240..272 CDD:320011 11/30 (37%)
Thyroglobulin_1 276..339 CDD:459665
Blue background indicates that the domain is not in the aligned region.

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