DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and sparc

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001001942.1 Gene:sparc / 321357 ZFINID:ZDB-GENE-030131-9 Length:291 Species:Danio rerio


Alignment Length:317 Identity:91/317 - (28%)
Similarity:139/317 - (43%) Gaps:66/317 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LWLLLGLGLLAVSHVQASTEFSEDLLDEDLD--LSDIDENEEEFLRLLEEKNKIKDIERENEIAT 66
            :|:.. |..||...:.|.|| .|..::|:|:  ::.:.....||...:|   .::|:..||.   
Zfish     3 VWIFF-LFCLAGKTLAAPTE-EEPAVEEELEVGINPVQVETGEFDEAIE---VVEDVIAENP--- 59

  Fly    67 KLAEVQHNLLNPVVEVDLCETMSCGAGRICQMHD-EKPKCVCIP--ECPEEVDTRRLVCTNTNET 128
                              |....|..|::|::.| .:|.|||..  .||..:.....||...|:|
Zfish    60 ------------------CLNHHCKKGKVCEVDDSNQPMCVCQDPLTCPAPIGDFEHVCGTNNKT 106

  Fly   129 WPSDCSVYQQRCWCDSGEPGCTNPDNAH-MHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMR 192
            :.|.|..:..:|..:..:.|       | :||||.|.|.....|...:|.:||.||||||.||:.
Zfish   107 YESSCHFFATKCSLEGTKKG-------HKLHIDYIGPCKYIAPCLENELNEFPLRMRDWLKNVLV 164

  Fly   193 DLAERDE----LTEHYMQMELEAETNNSRRWS-----------------NAAV----WKWCDLD- 231
            .|.||||    |||. .::.::....|.:|..                 |..:    |::..|| 
Zfish   165 TLYERDEDNNLLTEK-QKLRVKKIYENEKRLQAGDHSLDLLALDFEKNYNMYIFPVHWQFGQLDQ 228

  Fly   232 GDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLELDPEDL 288
            ...|..:|..||.|:||||:.:|||...|.|.||:::|..|.|.||..|..:..:|:
Zfish   229 HPIDGFLSHTELAPLRAPLIPMEHCTTSFFEQCDADQDKYIALEEWANCFGIKEQDV 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 26/86 (30%)
SPARC_Ca_bdg 169..278 CDD:287550 46/134 (34%)
SPARC_EC 170..292 CDD:238155 49/145 (34%)
sparcNP_001001942.1 FSL_SPARC 59..140 CDD:238649 26/108 (24%)
SPARC_EC 142..289 CDD:238155 49/145 (34%)
SPARC_Ca_bdg 142..275 CDD:287550 46/133 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594917
Domainoid 1 1.000 73 1.000 Domainoid score I9203
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 119 1.000 Inparanoid score I4765
OMA 1 1.010 - - QHG46414
OrthoDB 1 1.010 - - D1528521at2759
OrthoFinder 1 1.000 - - FOG0003487
OrthoInspector 1 1.000 - - otm26401
orthoMCL 1 0.900 - - OOG6_105759
Panther 1 1.100 - - O PTHR13866
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2812
SonicParanoid 1 1.000 - - X2378
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.800

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