DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and Sparcl1

DIOPT Version :10

Sequence 1:NP_651509.2 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_037078.2 Gene:Sparcl1 / 25434 RGDID:2531 Length:634 Species:Rattus norvegicus


Alignment Length:305 Identity:85/305 - (27%)
Similarity:126/305 - (41%) Gaps:68/305 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 EFSEDLLDEDLDLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNPVVE------ 81
            ::.|:..||..:.|:..:|:                      ..|.||...| ..|..|      
  Rat   357 KYGEETPDESENRSEAGDNQ----------------------GAKKAESSPN-AEPSDEGNSRGH 398

  Fly    82 -VDLCETMSCGAGRICQMHDE-KPKCVCIPECPEEVDTRRLV---CTNTNETWPSDCSVYQQRCW 141
             .|.|....|..|..|:.... ||.|||  :.||.....:::   |...|:|:.|.|.::..:|.
  Rat   399 SADSCMNFQCKRGHTCKTDQHGKPHCVC--QDPETCPPAKILDQACGTDNQTYASSCHLFATKCM 461

  Fly   142 CDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAE---------- 196
            .:..:.|      ..:.:||:|||....:|...::..||.||||||.|::..|.|          
  Rat   462 LEGTKKG------HQLQLDYFGACKSIPACTDFEVAQFPLRMRDWLKNILMQLYEPNPKHGGYLN 520

  Fly   197 -----------RDE----LTEHYMQMELEAETNNSRRWSNAAVWKWCDLD-GDTDRSVSRHELFP 245
                       .||    ..:|.:::.|.....|...:.....|::.:|| ...||.::..||.|
  Rat   521 EKQRSKVKKIYLDEKRLLAGDHPIELLLRDFKKNYHMYVYPVHWQFNELDQHPADRILTHSELAP 585

  Fly   246 IRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLELDPEDLKE 290
            :||.||.:||||..|.|.||.|||..|||.|||.|..:..||:.|
  Rat   586 LRASLVPMEHCITRFFEECDPNKDKHITLKEWGHCFGIKEEDIDE 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_651509.2 FSL_SPARC 85..168 CDD:238649 23/86 (27%)
EFh_SPARC_like 171..285 CDD:320010 47/139 (34%)
EF-hand motif 219..251 CDD:320010 10/32 (31%)
EF-hand motif 253..285 CDD:320010 18/31 (58%)
Sparcl1NP_037078.2 MSCRAMM_ClfA <46..291 CDD:468110
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 50..335
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 360..398 11/60 (18%)
KAZAL_FS 403..482 CDD:412159 23/86 (27%)
EFh_SPARC_SPARCL1 485..625 CDD:320015 47/139 (34%)
EF-hand motif 558..591 CDD:320015 10/32 (31%)
EF-hand motif 593..625 CDD:320015 18/31 (58%)
Blue background indicates that the domain is not in the aligned region.

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