DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and Sparc

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_036788.1 Gene:Sparc / 24791 RGDID:3742 Length:301 Species:Rattus norvegicus


Alignment Length:335 Identity:90/335 - (26%)
Similarity:141/335 - (42%) Gaps:83/335 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRSLWLLLGLGLLAVSHVQASTEFSEDLLDED----------------LDLSDIDENEEEFLRLL 49
            ||: |:...|.|...:.....||.:|:::.|:                :::.:.:|..||     
  Rat     1 MRA-WIFFLLCLAGRALAAPQTEAAEEMVAEETVVEETGLPVGANPVQVEMGEFEEGAEE----- 59

  Fly    50 EEKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAGRICQMHDEK-PKCVC--IPEC 111
                .::::..||.                     |:...|..|::|::.:.. |.|||  ...|
  Rat    60 ----TVEEVVAENP---------------------CQNHHCKHGKVCELDESNTPMCVCQDPTSC 99

  Fly   112 PEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGEPGCTNPDNAH-MHIDYYGACHEPRSCEGED 175
            |..:.....||:|.|:|:.|.|..:..:|..:..:.|       | :|:||.|.|.....|...:
  Rat   100 PAPIGEFEKVCSNDNKTFDSSCHFFATKCTLEGTKKG-------HKLHLDYIGPCKYIAPCLDSE 157

  Fly   176 LKDFPRRMRDWLFNVMRDLAERDE----LTE---------HYMQMELEAETN-----------NS 216
            |.:||.||||||.||:..|.||||    |||         |..:..|||..:           |.
  Rat   158 LTEFPLRMRDWLKNVLVTLYERDEGNNLLTEKQKLRVKKIHENEKRLEAGDHPVELLARDFEKNY 222

  Fly   217 RRWSNAAVWKWCDLD-GDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGAC 280
            ..:.....|::..|| ...|..:|..||.|:||||:.:|||...|.|:||.:.|..|.|.||..|
  Rat   223 NMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALEEWAGC 287

  Fly   281 LELDPEDLKE 290
            ..:..:|:.:
  Rat   288 FGIKEQDINK 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 25/86 (29%)
SPARC_Ca_bdg 169..278 CDD:287550 48/133 (36%)
SPARC_EC 170..292 CDD:238155 51/146 (35%)
SparcNP_036788.1 FSL_SPARC 69..150 CDD:238649 25/108 (23%)
EFh_SPARC_SPARC 153..292 CDD:320014 50/138 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352944
Domainoid 1 1.000 76 1.000 Domainoid score I8741
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 125 1.000 Inparanoid score I4615
OMA 1 1.010 - - QHG46414
OrthoDB 1 1.010 - - D1528521at2759
OrthoFinder 1 1.000 - - FOG0003487
OrthoInspector 1 1.000 - - otm45391
orthoMCL 1 0.900 - - OOG6_105759
Panther 1 1.100 - - O PTHR13866
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2378
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.810

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