DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SPARC and Spock1

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_033288.2 Gene:Spock1 / 20745 MGIID:105371 Length:442 Species:Mus musculus


Alignment Length:305 Identity:65/305 - (21%)
Similarity:104/305 - (34%) Gaps:81/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DLLDEDLDLSDI-------------DENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNP 78
            :.||.|..||.:             ||.|:::.|   ..|..|..::              .|:|
Mouse    37 NFLDNDQWLSTVSQYDRDKYWNRFRDEVEDDYFR---NWNPNKPFDQ--------------ALDP 84

  Fly    79 VVEVDLCETMSCGAGRICQMHD-EKPKCV---------------------------CIPECPEEV 115
              ..|.|..:.|...::|...| :...||                           |.| ||  |
Mouse    85 --SKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNVAHKHWLGPSNLVKCKP-CP--V 144

  Fly   116 DTRRLVCTNTNETWPSDCSVYQQRC--------WCDSGEPGCTNPDNAHMHIDYYGACHEPRSCE 172
            ....:||.:...|:.|.|.:....|        .||...|....|:......       |..:|.
Mouse   145 AQSAMVCGSDGHTYTSKCKLEFHACSTGKSLNSLCDGPCPCLPEPEPLKPKA-------EKSACT 202

  Fly   173 GEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRS 237
            .::|::...|::|| |..:.:.|.|..........:...:|:......::..|.:..||.:.|..
Mouse   203 DKELRNLASRLKDW-FGALHEDANRVIKPTSSDPAQGRFDTSILPICKDSLGWMFNKLDMNYDLL 266

  Fly   238 VSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLE 282
            :...|:..|.  |...|.||.|...||||.||.:::..||..|.:
Mouse   267 LDHSEINAIY--LDKYEPCIKPLFNSCDSFKDGKLSNNEWCYCFQ 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 21/118 (18%)
SPARC_Ca_bdg 169..278 CDD:287550 27/108 (25%)
SPARC_EC 170..292 CDD:238155 29/113 (26%)
Spock1NP_033288.2 KAZAL 140..181 CDD:197624 11/43 (26%)
SPARC_Ca_bdg 199..305 CDD:287550 27/108 (25%)
SPARC_EC 200..318 CDD:238155 29/113 (26%)
TY 315..376 CDD:238114
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..395
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..442
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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