DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and ost-1

DIOPT Version :10

Sequence 1:NP_651509.2 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_500039.1 Gene:ost-1 / 176931 WormBaseID:WBGene00003893 Length:264 Species:Caenorhabditis elegans


Alignment Length:294 Identity:110/294 - (37%)
Similarity:155/294 - (52%) Gaps:45/294 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLGLGLLAVSHVQA-STEFSEDLLDEDLDLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLA 69
            |||   |.|.|.|.| ..:.::|.|.|.||..|.|          |||..::..:          
 Worm     9 LLL---LAASSFVDAKKKKIADDELGELLDNIDAD----------EEKKSVEPAK---------- 50

  Fly    70 EVQHNLLNPVVEVDLCETMSCGAGRICQMHDE-KPKCVCIPECPE-EVDTRRLVCTNTNETWPSD 132
                   ||      ||...||.|:.|.:..: :|.|.||.:||| :.|....||.|.|:|:.|.
 Worm    51 -------NP------CEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSL 102

  Fly   133 CSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAER 197
            |.:|::||.|......|:...||.:|::|.|.|.:...|..|.:..||.||.||||.||::|.:|
 Worm   103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKR 167

  Fly   198 DELTEHYMQME---LEAETNNSRRWSNAAVWKWCDLDGDT-DRSVSRHELFPIRAPLVSLEHCIA 258
            .||  |.::.|   .|||.::.::.....:||:|:||... |:|||.|||.||.||::.:|.||.
 Worm   168 REL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIK 230

  Fly   259 PFLESCDSNKDHRITLVEWGACLELDPEDLKERC 292
            ||||.||:|.|..|::.|||.||.|...:::|||
 Worm   231 PFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_651509.2 FSL_SPARC 85..168 CDD:238649 32/84 (38%)
EFh_SPARC_like 171..285 CDD:320010 55/117 (47%)
EF-hand motif 219..251 CDD:320010 16/32 (50%)
EF-hand motif 253..285 CDD:320010 18/31 (58%)
ost-1NP_500039.1 FSL_SPARC 52..138 CDD:238649 33/91 (36%)
EFh_SPARC_like 141..257 CDD:320010 55/117 (47%)
EF-hand motif 190..223 CDD:320010 16/32 (50%)
EF-hand motif 225..257 CDD:320010 18/31 (58%)

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