DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and ost-1

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_500039.1 Gene:ost-1 / 176931 WormBaseID:WBGene00003893 Length:264 Species:Caenorhabditis elegans


Alignment Length:294 Identity:110/294 - (37%)
Similarity:155/294 - (52%) Gaps:45/294 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLLGLGLLAVSHVQA-STEFSEDLLDEDLDLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLA 69
            |||   |.|.|.|.| ..:.::|.|.|.||..|.|          |||..::..:          
 Worm     9 LLL---LAASSFVDAKKKKIADDELGELLDNIDAD----------EEKKSVEPAK---------- 50

  Fly    70 EVQHNLLNPVVEVDLCETMSCGAGRICQMHDE-KPKCVCIPECPE-EVDTRRLVCTNTNETWPSD 132
                   ||      ||...||.|:.|.:..: :|.|.||.:||| :.|....||.|.|:|:.|.
 Worm    51 -------NP------CEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSL 102

  Fly   133 CSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAER 197
            |.:|::||.|......|:...||.:|::|.|.|.:...|..|.:..||.||.||||.||::|.:|
 Worm   103 CDLYRERCLCKRKSKECSKAFNAKVHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKR 167

  Fly   198 DELTEHYMQME---LEAETNNSRRWSNAAVWKWCDLDGDT-DRSVSRHELFPIRAPLVSLEHCIA 258
            .||  |.::.|   .|||.::.::.....:||:|:||... |:|||.|||.||.||::.:|.||.
 Worm   168 REL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDKSVSHHELIPITAPVIPMESCIK 230

  Fly   259 PFLESCDSNKDHRITLVEWGACLELDPEDLKERC 292
            ||||.||:|.|..|::.|||.||.|...:::|||
 Worm   231 PFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 32/84 (38%)
SPARC_Ca_bdg 169..278 CDD:287550 50/112 (45%)
SPARC_EC 170..292 CDD:238155 56/125 (45%)
ost-1NP_500039.1 FSL_SPARC 52..138 CDD:238649 33/91 (36%)
SPARC_Ca_bdg 139..250 CDD:287550 50/112 (45%)
SPARC_EC 140..264 CDD:238155 56/125 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166476
Domainoid 1 1.000 111 1.000 Domainoid score I3917
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3438
Inparanoid 1 1.050 185 1.000 Inparanoid score I2612
Isobase 1 0.950 - 0 Normalized mean entropy S5025
OMA 1 1.010 - - QHG46414
OrthoDB 1 1.010 - - D1528521at2759
OrthoFinder 1 1.000 - - FOG0003487
OrthoInspector 1 1.000 - - oto18725
orthoMCL 1 0.900 - - OOG6_105759
Panther 1 1.100 - - LDO PTHR13866
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2812
SonicParanoid 1 1.000 - - X2378
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.850

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