DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and Fst

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:NP_001288302.1 Gene:Fst / 14313 MGIID:95586 Length:344 Species:Mus musculus


Alignment Length:90 Identity:24/90 - (26%)
Similarity:46/90 - (51%) Gaps:15/90 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DLCETMSCGAGRICQMHDE-KPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGE 146
            :.||.:.||.|:.|:|:.: ||:|||.|:| ..:..:..||....:|:.::|::.:.||      
Mouse    93 ETCENVDCGPGKKCRMNKKNKPRCVCAPDC-SNITWKGPVCGLDGKTYRNECALLKARC------ 150

  Fly   147 PGCTNPDNAHMHIDYYGACHEPRSC 171
                 .:...:.:.|.|.|  .::|
Mouse   151 -----KEQPELEVQYQGKC--KKTC 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 23/83 (28%)
SPARC_Ca_bdg 169..278 CDD:287550 1/3 (33%)
SPARC_EC 170..292 CDD:238155 1/2 (50%)
FstNP_001288302.1 FOLN 95..116 CDD:370409 9/20 (45%)
KAZAL 117..164 CDD:197624 12/58 (21%)
FOLN 167..190 CDD:128570 1/2 (50%)
KAZAL 192..239 CDD:197624
KAZAL 270..316 CDD:197624
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..344
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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