DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and spock1

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_021336759.1 Gene:spock1 / 110440200 ZFINID:ZDB-GENE-110428-1 Length:454 Species:Danio rerio


Alignment Length:333 Identity:81/333 - (24%)
Similarity:121/333 - (36%) Gaps:65/333 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRSLWLLLGLGLLAVSHVQASTEFSEDLLDEDLDLSDIDE----------NEEEFLRLLEEKNKI 55
            |.||.|.:.|..|.|| |..|::.:.  ||.|..:|.:.:          .::::.|.. ..||.
Zfish     2 MLSLGLFVSLVGLTVS-VTGSSDGNP--LDNDKWMSTVSQYDKSKYWNKFRDDDYFRTW-NPNKA 62

  Fly    56 KDIERENEIATKLAEVQHNLLNPVV------EVDLCETMSCGAGRICQMHD--------EKP--- 103
            :|.|......|:|....|:......      ..|.|..:.|...::|..||        .||   
Zfish    63 QDQEHAPNQRTELNHKSHSKTKSRTTDGLDSTKDPCMKVHCPPHKVCVSHDYQTAICTNHKPAQH 127

  Fly   104 ---------------------KCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGE- 146
                                 ||   ..||  |....|||.:...|:.|.|.:..|.  |.||: 
Zfish   128 SVKAKKGNIPHKRWMGAVNHGKC---RPCP--VVHSSLVCGSDGHTYASKCKLEFQA--CSSGKS 185

  Fly   147 --PGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQMEL 209
              ..|..|.......:......|...|...||:....|::|| |.|:...|.||..|......:.
Zfish   186 LSAKCEGPCPCLPGQEVIKPHTEKNGCTDADLRSLASRLKDW-FGVLHTDANRDLKTSTSEAAQG 249

  Fly   210 EAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITL 274
            ..:|:......::..|.:..||.:.|..:.:.||..|.  |...|.|:.|...||||.||.:::.
Zfish   250 RFDTSILPICKDSLGWMFNKLDMNYDLLLDQSELSAIY--LDKYELCMRPLFNSCDSFKDGKLSN 312

  Fly   275 VEWGACLE 282
            .||..|.:
Zfish   313 NEWCYCFQ 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 24/117 (21%)
SPARC_Ca_bdg 169..278 CDD:287550 31/108 (29%)
SPARC_EC 170..292 CDD:238155 33/113 (29%)
spock1XP_021336759.1 KAZAL 153..194 CDD:197624 14/44 (32%)
EFh_SPARC_EC 212..323 CDD:330171 33/112 (29%)
EF-hand motif 259..290 CDD:320009 8/32 (25%)
EF-hand motif 291..321 CDD:320009 12/30 (40%)
Thyroglobulin_1 327..390 CDD:306570
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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