DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and sparcl2

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_017207307.1 Gene:sparcl2 / 100534809 ZFINID:ZDB-GENE-131127-575 Length:259 Species:Danio rerio


Alignment Length:212 Identity:60/212 - (28%)
Similarity:96/212 - (45%) Gaps:42/212 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LCETMSCGA--GRICQMHDEK----PKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWC 142
            ||:.:.|.:  |..||:..|:    |||||...||.:   |..||:...:|:.::|.::::.|..
Zfish    47 LCQLLKCHSPIGSWCQVVKEEGVLTPKCVCPSTCPRQ---RAPVCSVLGKTYSNECLLHKEACRK 108

  Fly   143 DSGEPGCTNPDNAHMHIDYYGAC-HEPRSCEGEDLKDFPRRMRDWLFNVMRDLAER-------DE 199
            :      .....||     .||| .....|..|:...||.|:.|| |.::..:.||       ..
Zfish   109 E------RRIGKAH-----NGACLVSETGCSEEEFGQFPYRLLDW-FLLLSRMGERYTPAAPSQS 161

  Fly   200 LTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESC 264
            ...|..:|:|             |..::..||.:.|..:||.:|..:....:.||||...|.:||
Zfish   162 CLSHTQRMQL-------------AQRRFVLLDRNRDGKLSRRDLRKLHYKRMPLEHCAQRFFQSC 213

  Fly   265 DSNKDHRITLVEWGACL 281
            |.|::.::||.||.:||
Zfish   214 DKNQNKKVTLREWTSCL 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 24/89 (27%)
SPARC_Ca_bdg 169..278 CDD:287550 32/115 (28%)
SPARC_EC 170..292 CDD:238155 35/119 (29%)
sparcl2XP_017207307.1 KAZAL 75..120 CDD:197624 13/58 (22%)
SPARC_EC 127..232 CDD:238155 35/118 (30%)
SPARC_Ca_bdg 127..226 CDD:287550 31/112 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594919
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4004
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528521at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105759
Panther 1 1.100 - - O PTHR13866
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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