DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPARC and spock2

DIOPT Version :9

Sequence 1:NP_001262998.1 Gene:SPARC / 43230 FlyBaseID:FBgn0026562 Length:304 Species:Drosophila melanogaster
Sequence 2:XP_012821500.1 Gene:spock2 / 100144943 XenbaseID:XB-GENE-1003767 Length:422 Species:Xenopus tropicalis


Alignment Length:372 Identity:83/372 - (22%)
Similarity:138/372 - (37%) Gaps:121/372 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLWLLLGLGLLAVSHVQA---STEFSEDLLDEDLDLSDI--------------DENEEEFLRLLE 50
            |..:||.| ||.::..|.   ..|.:.:.::::..||.|              ||.|:::::..|
 Frog     7 SCLILLPL-LLPIAWAQGDGKEVENTGNFMEDEQWLSSINQYSGKIKHWNRFRDEVEDDYIKSWE 70

  Fly    51 EKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAGRICQMHDEKPKCVCIPE----- 110
            : |:..|   |....||               |.|:.:.|...::|..|..: |.:||..     
 Frog    71 D-NQPGD---EALDTTK---------------DPCQKVKCSRHKVCIAHGYQ-KAMCISRKKLEH 115

  Fly   111 ----------------C-PEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMH 158
                            | |..|.....||.:...|:.|.|.:.||.|.           .:..:.
 Frog   116 RIKQPSMKIHGNRDSLCKPCHVTQPAAVCGSDGHTYSSVCKLEQQACL-----------SSKQLT 169

  Fly   159 IDYYGAC-----HEP----------RSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTE------ 202
            :...|:|     |.|          .:|.|:||.|...|:||| |.::.:.::::..:.      
 Frog   170 VKCQGSCPCPTEHTPTTTTETGKQGETCTGQDLADLGDRLRDW-FQLLHENSKQNNTSNPGSKQV 233

  Fly   203 HYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSN 267
            :.:...|.|...:|      ..|.:..||.:.|..:.:.||..|.  |...|.||.||..|||:.
 Frog   234 NVLDKSLVAGCKDS------IGWMFSKLDSNNDLFLDQAELAAIN--LDKYEICIRPFFNSCDTY 290

  Fly   268 KDHRITLVEWGAC---------LELDPEDLKE-----------RCDD 294
            ||.|::..||..|         :||:...::|           .||:
 Frog   291 KDGRVSTAEWCFCFWREKPPCLVELEKVQIQEAAKRKPGVFIPSCDE 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPARCNP_001262998.1 FSL_SPARC 85..168 CDD:238649 21/109 (19%)
SPARC_Ca_bdg 169..278 CDD:287550 33/114 (29%)
SPARC_EC 170..292 CDD:238155 38/147 (26%)
spock2XP_012821500.1 KAZAL <143..176 CDD:197624 9/43 (21%)
EFh_SPARC_TICN2 197..308 CDD:320017 35/119 (29%)
EF-hand motif 244..275 CDD:320017 9/38 (24%)
EF-hand motif 276..308 CDD:320017 14/31 (45%)
TY 310..374 CDD:238114 5/28 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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